Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0456
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    23   3.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.6  

>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = +1

Query: 508 LQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHH 678
           LQ  +Y+E +   + R+Y S  FI+       V    L L    I HL  H    HH
Sbjct: 59  LQEMKYLERAIKESLRLYPSVHFISRKLGEDFVTCNGLKLPKSTITHL--HIYDLHH 113


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 475 FNYFIRILFYYLQAYEYIEASFTIADRIYGSTFFIA 582
           ++YF  + + Y      +   F   D++ G T F+A
Sbjct: 85  YSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLA 120


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 475 FNYFIRILFYYLQAYEYIEASFTIADRIYGSTFFIA 582
           ++YF  + + Y      +   F   D++ G T F+A
Sbjct: 41  YSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLA 76


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 640 IRHLNNHFSKNHHF 681
           ++ L+NH  KN H+
Sbjct: 560 LKELSNHMVKNSHY 573


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,937
Number of Sequences: 336
Number of extensions: 2274
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)