Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0456
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81119-2|CAB03332.1| 350|Caenorhabditis elegans Hypothetical pr... 29 3.2
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 29 3.2
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 3.2
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 3.2
AL023856-1|CAA19566.1| 327|Caenorhabditis elegans Hypothetical ... 28 7.3
Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical p... 27 9.7
Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical p... 27 9.7
Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical pr... 27 9.7
>Z81119-2|CAB03332.1| 350|Caenorhabditis elegans Hypothetical
protein T10H4.3 protein.
Length = 350
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 440 ENNFSQTKQRLFLTILLGFYFTIYKHMNI*KLLLQLLIEFMDPLFS*QQDFME 598
++NF T Q F+ I++ F+ T+ M LLLQL + + S Q D +E
Sbjct: 190 QSNFDLTNQLCFIEIIIRFFQTLLYPMLTLTLLLQLHMIKKKRIISSQNDKVE 242
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 335 PSRITPFNPFQIPLLNTIIL 394
PS +TPFNP+Q+ + I+L
Sbjct: 82 PSMVTPFNPYQLMMYRNIML 101
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 335 PSRITPFNPFQIPLLNTIIL 394
PS +TPFNP+Q+ + I+L
Sbjct: 82 PSMVTPFNPYQLMMYRNIML 101
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 335 PSRITPFNPFQIPLLNTIIL 394
PS +TPFNP+Q+ + I+L
Sbjct: 82 PSMVTPFNPYQLMMYRNIML 101
>AL023856-1|CAA19566.1| 327|Caenorhabditis elegans Hypothetical
protein Y94A7B.4 protein.
Length = 327
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 493 ILFYYLQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICY 639
+LF+ A + + T +++ + F I T FHG+ I ++L CY
Sbjct: 249 LLFFAPAATGILTSQQTSNEQLEHNLFVITTSFHGVLSTILMIYLQKCY 297
>Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 517 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 666
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 309 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 365
>Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 517 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 666
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 355 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 411
>Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 517 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 666
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 309 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 365
>Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 517 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 666
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 355 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 411
>Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical
protein F14F11.1g protein.
Length = 513
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 517 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 666
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 279 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 335
>Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical
protein F14F11.1f protein.
Length = 510
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 517 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 666
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 276 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 332
>Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical
protein F14F11.1e protein.
Length = 516
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 517 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 666
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 282 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 338
>Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical
protein F14F11.1d protein.
Length = 503
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 517 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 666
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 269 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 325
>Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical
protein F14F11.1a protein.
Length = 493
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 517 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 666
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 259 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 315
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,314,657
Number of Sequences: 27780
Number of extensions: 180584
Number of successful extensions: 546
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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