Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0455
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   4.0  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   7.0  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   7.0  
CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    23   9.2  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 453 LHNDCLHRGTYP 418
           L+ DCL RGT+P
Sbjct: 530 LYQDCLSRGTFP 541


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 246 RTLIVRLLCSEYYSIGGPLIKSTRVGSLYTTVL 148
           R + VR   + YY   GP+I++ ++   Y T+L
Sbjct: 182 RAIPVRKERAAYYKAIGPVIRNFKLTLTYVTLL 214


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 453 LHNDCLHRGTYP*NLARPPRAYFSK 379
           ++ DCL RGT+P    R      SK
Sbjct: 469 MYQDCLTRGTFPSEWKRQRLVLLSK 493


>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 199 AYRIIFRTQ*SHDKRSLVNSIDN 267
           AYR+  R   SHD  +LV S+ N
Sbjct: 246 AYRLADRFGYSHDSATLVQSLRN 268


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,981
Number of Sequences: 2352
Number of extensions: 10794
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)