Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0455
         (699 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73971-9|CAH04730.1|  522|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z73971-8|CAA98250.1|  488|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AY532645-1|AAS21318.1|  522|Caenorhabditis elegans egg laying de...    29   4.2  
U58753-1|AAC24437.2|  814|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z22181-11|CAE18061.1|  206|Caenorhabditis elegans Hypothetical p...    27   9.8  

>Z73971-9|CAH04730.1|  522|Caenorhabditis elegans Hypothetical
           protein C50H2.2a protein.
          Length = 522

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -2

Query: 641 NIIITIYVHVYSIYIEFY*ILQNVISAYSHRHRTNIR*FNYKF 513
           NII  +Y H+Y+I + FY   + +I + +  H+   R F+ KF
Sbjct: 286 NIIPLLYYHLYNILVRFY--CRTLIKSMNREHKK--RHFSLKF 324


>Z73971-8|CAA98250.1|  488|Caenorhabditis elegans Hypothetical
           protein C50H2.2b protein.
          Length = 488

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -2

Query: 641 NIIITIYVHVYSIYIEFY*ILQNVISAYSHRHRTNIR*FNYKF 513
           NII  +Y H+Y+I + FY   + +I + +  H+   R F+ KF
Sbjct: 252 NIIPLLYYHLYNILVRFY--CRTLIKSMNREHKK--RHFSLKF 290


>AY532645-1|AAS21318.1|  522|Caenorhabditis elegans egg laying
           defective EGL-47A protein.
          Length = 522

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -2

Query: 641 NIIITIYVHVYSIYIEFY*ILQNVISAYSHRHRTNIR*FNYKF 513
           NII  +Y H+Y+I + FY   + +I + +  H+   R F+ KF
Sbjct: 286 NIIPLLYYHLYNILVRFY--CRTLIKSMNREHKK--RHFSLKF 324


>U58753-1|AAC24437.2|  814|Caenorhabditis elegans Hypothetical
           protein W03B1.2 protein.
          Length = 814

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = -1

Query: 354 FLISTKSTENTRSLL---NVTFYSVTYQQSFSIINRIHERTLI-VRLLCSEY 211
           F+++      +R+LL   N   Y+VT+Q  F I   + +   I + L CSEY
Sbjct: 496 FVLAVIHVSISRTLLATSNSFLYTVTFQGKFEIFGEVQDEDRIGILLNCSEY 547


>Z22181-11|CAE18061.1|  206|Caenorhabditis elegans Hypothetical
          protein ZK632.14 protein.
          Length = 206

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 17 YLKDYFEESVVCNRYVV 67
          +++DYF ES  CNR+VV
Sbjct: 44 HVRDYFTESPDCNRFVV 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,250,838
Number of Sequences: 27780
Number of extensions: 243184
Number of successful extensions: 439
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)