Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0455
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.6  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    23   2.8  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    23   2.8  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    23   2.8  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    23   2.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.4  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 199 RPLNKIDQSRFLIYYRFNMDIKILSIVNHLK*SILTF 89
           +  N + +   + Y  FN DIK +S    +K S L F
Sbjct: 518 KAFNNVPKKLNMFYNNFNSDIKSISNNEQVKVSALGF 554


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 199 RPLNKIDQSRFLIYYRFNMDIKILSIVNHLK*SILTF 89
           +  N + +   + Y  FN DIK +S    +K S L F
Sbjct: 518 KAFNNVPKKLNMFYNNFNSDIKSISNNEQVKVSALGF 554


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 612 YMYIYRNNDVITELFCNIN 668
           Y Y Y NN+   +L+ NIN
Sbjct: 95  YKYNYNNNNYNKKLYYNIN 113


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 612 YMYIYRNNDVITELFCNIN 668
           Y Y Y NN+   +L+ NIN
Sbjct: 95  YKYNYNNNNYNKKLYYNIN 113


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 612 YMYIYRNNDVITELFCNIN 668
           Y Y Y NN+   +L+ NIN
Sbjct: 95  YKYNYNNNNYNKKLYYNIN 113


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 612 YMYIYRNNDVITELFCNIN 668
           Y Y Y NN+   +L+ NIN
Sbjct: 95  YKYNYNNNNYNKKLYYNIN 113


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 2   YGTKKYLKDYFEESVVCNRY 61
           Y   +Y  DYF E V  N Y
Sbjct: 214 YNDPEYKLDYFMEDVELNAY 233


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 2   YGTKKYLKDYFEESVVCNRY 61
           Y   +Y  DYF E V  N Y
Sbjct: 214 YNDPEYKLDYFMEDVELNAY 233


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,902
Number of Sequences: 438
Number of extensions: 3198
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)