SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0452
         (698 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007069-1|AAH07069.1|  162|Homo sapiens riboflavin kinase protein.    95   2e-19
AL391868-2|CAI40676.1|  155|Homo sapiens riboflavin kinase protein.    95   2e-19
AK002011-1|BAA92033.1|  162|Homo sapiens protein ( Homo sapiens ...    95   2e-19
Z95113-1|CAI17901.1|  836|Homo sapiens protein ( Human DNA seque...    30   9.1  
CR456397-1|CAG30283.1|  836|Homo sapiens bK175E3.6 protein.            30   9.1  
BC094857-1|AAH94857.1|  643|Homo sapiens ZNRF3 protein protein.        30   9.1  
BC069019-1|AAH69019.1|  643|Homo sapiens ZNRF3 protein protein.        30   9.1  
BC040291-1|AAH40291.1|  608|Homo sapiens family with sequence si...    30   9.1  
BC021570-1|AAH21570.1|  653|Homo sapiens ZNRF3 protein protein.        30   9.1  
BC009252-1|AAH09252.2|  644|Homo sapiens ZNRF3 protein protein.        30   9.1  
AL021393-4|CAI17992.1|  836|Homo sapiens protein ( Human DNA seq...    30   9.1  
AK074156-1|BAB84982.1|  627|Homo sapiens FLJ00229 protein protein.     30   9.1  
AB051436-1|BAB33319.1|  891|Homo sapiens KIAA1133 protein protein.     30   9.1  

>BC007069-1|AAH07069.1|  162|Homo sapiens riboflavin kinase protein.
          Length = 162

 Score = 95.1 bits (226), Expect = 2e-19
 Identities = 38/64 (59%), Positives = 51/64 (79%)
 Frame = +2

Query: 317 LPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEMVA 496
           LP+F  G+VV+GFGRGSK+LG PTAN+P +VV +LP  +  G+YYGWA V +G V++MV 
Sbjct: 11  LPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVV 70

Query: 497 NIGW 508
           +IGW
Sbjct: 71  SIGW 74



 Score = 65.3 bits (152), Expect = 2e-10
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = +1

Query: 511 PFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCL 642
           P+Y+N + S+ETHIMH F+ DFYG  L +A++GYLR EKNF+ L
Sbjct: 76  PYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSL 119


>AL391868-2|CAI40676.1|  155|Homo sapiens riboflavin kinase protein.
          Length = 155

 Score = 95.1 bits (226), Expect = 2e-19
 Identities = 38/64 (59%), Positives = 51/64 (79%)
 Frame = +2

Query: 317 LPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEMVA 496
           LP+F  G+VV+GFGRGSK+LG PTAN+P +VV +LP  +  G+YYGWA V +G V++MV 
Sbjct: 4   LPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVV 63

Query: 497 NIGW 508
           +IGW
Sbjct: 64  SIGW 67



 Score = 65.3 bits (152), Expect = 2e-10
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = +1

Query: 511 PFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCL 642
           P+Y+N + S+ETHIMH F+ DFYG  L +A++GYLR EKNF+ L
Sbjct: 69  PYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSL 112


>AK002011-1|BAA92033.1|  162|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11149 fis, clone PLACE1006731, weakly similar to
           RIBOFLAVIN KINASE (EC 2.7.1.26)/ FMN ADENYLYLTRANSFERASE
           (EC ).
          Length = 162

 Score = 95.1 bits (226), Expect = 2e-19
 Identities = 38/64 (59%), Positives = 51/64 (79%)
 Frame = +2

Query: 317 LPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEMVA 496
           LP+F  G+VV+GFGRGSK+LG PTAN+P +VV +LP  +  G+YYGWA V +G V++MV 
Sbjct: 11  LPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVV 70

Query: 497 NIGW 508
           +IGW
Sbjct: 71  SIGW 74



 Score = 65.3 bits (152), Expect = 2e-10
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = +1

Query: 511 PFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCL 642
           P+Y+N + S+ETHIMH F+ DFYG  L +A++GYLR EKNF+ L
Sbjct: 76  PYYKNTKKSMETHIMHTFKEDFYGEILSVAIVGYLRPEKNFDSL 119


>Z95113-1|CAI17901.1|  836|Homo sapiens protein ( Human DNA sequence
           from clone CTA-175E3 on chromosome 22q12.1. ).
          Length = 836

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 323 FFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYG 454
           F+ E +V +G G GS   GC T +Y + V  +L +   PG Y G
Sbjct: 681 FYEEKQVARGGGGGS---GCYTEDYSVSVQYTLTEEPPPGCYPG 721


>CR456397-1|CAG30283.1|  836|Homo sapiens bK175E3.6 protein.
          Length = 836

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 323 FFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYG 454
           F+ E +V +G G GS   GC T +Y + V  +L +   PG Y G
Sbjct: 681 FYEEKQVARGGGGGS---GCYTEDYSVSVQYTLTEEPPPGCYPG 721


>BC094857-1|AAH94857.1|  643|Homo sapiens ZNRF3 protein protein.
          Length = 643

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 323 FFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYG 454
           F+ E +V +G G GS   GC T +Y + V  +L +   PG Y G
Sbjct: 488 FYEEKQVARGGGGGS---GCYTEDYSVSVQYTLTEEPPPGCYPG 528


>BC069019-1|AAH69019.1|  643|Homo sapiens ZNRF3 protein protein.
          Length = 643

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 323 FFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYG 454
           F+ E +V +G G GS   GC T +Y + V  +L +   PG Y G
Sbjct: 488 FYEEKQVARGGGGGS---GCYTEDYSVSVQYTLTEEPPPGCYPG 528


>BC040291-1|AAH40291.1|  608|Homo sapiens family with sequence
           similarity 116, member A protein.
          Length = 608

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 667 SNLLYESIPDN*SSSLPSDTQL-EQFLN*NHRNHPGNCALYGFQQTSLYFGKKDPSYICY 491
           +N+ Y S PD+ S  L  DTQ   +F   + R    +C L  F +    + KKDP+Y   
Sbjct: 94  TNICYLSFPDSNSGCL-GDTQFCFRFRQSSGRRVSLHCLLDQFDKDLPVYLKKDPAYFYG 152

Query: 490 HLIYR 476
           ++ +R
Sbjct: 153 YVYFR 157


>BC021570-1|AAH21570.1|  653|Homo sapiens ZNRF3 protein protein.
          Length = 653

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 323 FFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYG 454
           F+ E +V +G G GS   GC T +Y + V  +L +   PG Y G
Sbjct: 498 FYEEKQVARGGGGGS---GCYTEDYSVSVQYTLTEEPPPGCYPG 538


>BC009252-1|AAH09252.2|  644|Homo sapiens ZNRF3 protein protein.
          Length = 644

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 323 FFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYG 454
           F+ E +V +G G GS   GC T +Y + V  +L +   PG Y G
Sbjct: 489 FYEEKQVARGGGGGS---GCYTEDYSVSVQYTLTEEPPPGCYPG 529


>AL021393-4|CAI17992.1|  836|Homo sapiens protein ( Human DNA
           sequence from clone CTA-747E2 on chromosome 22q12.1. ).
          Length = 836

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 323 FFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYG 454
           F+ E +V +G G GS   GC T +Y + V  +L +   PG Y G
Sbjct: 681 FYEEKQVARGGGGGS---GCYTEDYSVSVQYTLTEEPPPGCYPG 721


>AK074156-1|BAB84982.1|  627|Homo sapiens FLJ00229 protein protein.
          Length = 627

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 667 SNLLYESIPDN*SSSLPSDTQL-EQFLN*NHRNHPGNCALYGFQQTSLYFGKKDPSYICY 491
           +N+ Y S PD+ S  L  DTQ   +F   + R    +C L  F +    + KKDP+Y   
Sbjct: 113 TNICYLSFPDSNSGCL-GDTQFCFRFRQSSGRRVSLHCLLDQFDKDLPVYLKKDPAYFYG 171

Query: 490 HLIYR 476
           ++ +R
Sbjct: 172 YVYFR 176


>AB051436-1|BAB33319.1|  891|Homo sapiens KIAA1133 protein protein.
          Length = 891

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 323 FFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYG 454
           F+ E +V +G G GS   GC T +Y + V  +L +   PG Y G
Sbjct: 736 FYEEKQVARGGGGGS---GCYTEDYSVSVQYTLTEEPPPGCYPG 776


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,264,783
Number of Sequences: 237096
Number of extensions: 2148208
Number of successful extensions: 7782
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7782
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -