Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0452
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70686-5|CAA94613.1|  135|Caenorhabditis elegans Hypothetical pr...    82   3e-16
Z77665-8|CAB01224.2|  135|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U50311-7|AAA92311.1|  401|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U80029-19|AAB37598.1|  139|Caenorhabditis elegans Hypothetical p...    27   9.8  
AF106577-14|AAC78187.1|   68|Caenorhabditis elegans Hypothetical...    27   9.8  
AC006795-2|AAF59493.3|  421|Caenorhabditis elegans Hypothetical ...    27   9.8  

>Z70686-5|CAA94613.1|  135|Caenorhabditis elegans Hypothetical
           protein R10H10.6 protein.
          Length = 135

 Score = 82.2 bits (194), Expect = 3e-16
 Identities = 38/66 (57%), Positives = 48/66 (72%)
 Frame = +2

Query: 311 SVLPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEM 490
           ++LP+   GEVV+GFGRG KELGCPTAN    VV  LP+GL  GVY+G A++D G  Y+M
Sbjct: 2   NLLPYQFVGEVVRGFGRGGKELGCPTANMDGTVVNGLPEGLPVGVYFGTAKLD-GKSYKM 60

Query: 491 VANIGW 508
             +IGW
Sbjct: 61  AMSIGW 66



 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
 Frame = +1

Query: 487 DGSKYRMG------PFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCL 642
           DG  Y+M       P YQN++ +VE H++     DFYG  L   +IG++R  K+F  L
Sbjct: 54  DGKSYKMAMSIGWNPQYQNEKKTVELHLIDYSGSDFYGKTLSAVIIGFIREMKSFESL 111


>Z77665-8|CAB01224.2|  135|Caenorhabditis elegans Hypothetical
           protein K02E11.7 protein.
          Length = 135

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -2

Query: 136 YNDNLKVIKIHRLIITNYKPYHSHNLETTHKVNKRFL 26
           YN N K + I +++ T++  Y++ N +   KVN  FL
Sbjct: 97  YNKNKKALIIKQILKTDFGMYYTGNKKFEQKVNSLFL 133


>U50311-7|AAA92311.1|  401|Caenorhabditis elegans Hypothetical
           protein C25E10.1 protein.
          Length = 401

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +1

Query: 79  ACNXXXXXXXXXXXXNYRYKLLKSFLTCDLDECHTVSCILCLVMKCL 219
           AC             N  Y+ LK  + C+L++    SC  C   KCL
Sbjct: 22  ACRACAAFFRRFVVLNLEYECLKDEIKCNLNKIRRSSCRHCRFQKCL 68


>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical protein
            E01G6.1 protein.
          Length = 1391

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 323  FFLEGEVVKGFGRGSKELGCPTANYPL 403
            F + G  V GFG  + + GCP  + PL
Sbjct: 1103 FNMGGGAVPGFGNQASQSGCPLGSRPL 1129


>U80029-19|AAB37598.1|  139|Caenorhabditis elegans Hypothetical
           protein T20D4.19 protein.
          Length = 139

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 278 MKIFFQLRKMSSVLPFFLEGEVVKGFGRGSKELGCPTAN 394
           MK+F     +S+VLP   EG  V    R  K+  C TA+
Sbjct: 1   MKLFLLFITISTVLPSLAEGACVCPATRKVKDSNCTTAD 39


>AF106577-14|AAC78187.1|   68|Caenorhabditis elegans Hypothetical
           protein F46F5.8 protein.
          Length = 68

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +2

Query: 389 ANYPLEVVKSLPKGLEP 439
           ANYP  VV S PKGL P
Sbjct: 35  ANYPRAVVDSHPKGLRP 51


>AC006795-2|AAF59493.3|  421|Caenorhabditis elegans Hypothetical
           protein Y50D4B.6 protein.
          Length = 421

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 199 CLVMKCLLRQFFVISSFIYSK*KKESHENIFSIEENVISSA 321
           C+V+  L   F+ +  F Y +  KE HE   S+E  +I S+
Sbjct: 12  CIVVIALSVLFYYVWKFYYLR--KEEHEETRSLESGIIHSS 50


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,032,806
Number of Sequences: 27780
Number of extensions: 354416
Number of successful extensions: 810
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)