Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0451
         (396 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084129-1|AAL89867.1|  148|Drosophila melanogaster RE20991p pro...    27   9.0  
AE014297-2191|AAF55302.1|  179|Drosophila melanogaster CG14879-P...    27   9.0  
AE014297-2190|AAN13705.1|  148|Drosophila melanogaster CG14879-P...    27   9.0  

>AY084129-1|AAL89867.1|  148|Drosophila melanogaster RE20991p
           protein.
          Length = 148

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -1

Query: 183 RKRVSQLQLHDPS-FCSK*VCNADCTDIITLGARYTLPTKSKGE-FTKNGS*PCFNKDCF 10
           R  +S   L DP  F    V + DCTD IT   +  +PT++  E + +NG     +++ +
Sbjct: 22  RLSISGNLLQDPQQFSVNFVNSPDCTDNITYHFKVVIPTQTIIENYKRNGEWSSLHQEKY 81

Query: 9   L 7
           L
Sbjct: 82  L 82


>AE014297-2191|AAF55302.1|  179|Drosophila melanogaster CG14879-PA,
           isoform A protein.
          Length = 179

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -1

Query: 183 RKRVSQLQLHDPS-FCSK*VCNADCTDIITLGARYTLPTKSKGE-FTKNGS*PCFNKDCF 10
           R  +S   L DP  F    V + DCTD IT   +  +PT++  E + +NG     +++ +
Sbjct: 22  RLSISGNLLQDPQQFSVNFVNSPDCTDNITYHFKVVIPTQTIIENYKRNGEWSSLHQEKY 81

Query: 9   L 7
           L
Sbjct: 82  L 82


>AE014297-2190|AAN13705.1|  148|Drosophila melanogaster CG14879-PB,
           isoform B protein.
          Length = 148

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -1

Query: 183 RKRVSQLQLHDPS-FCSK*VCNADCTDIITLGARYTLPTKSKGE-FTKNGS*PCFNKDCF 10
           R  +S   L DP  F    V + DCTD IT   +  +PT++  E + +NG     +++ +
Sbjct: 22  RLSISGNLLQDPQQFSVNFVNSPDCTDNITYHFKVVIPTQTIIENYKRNGEWSSLHQEKY 81

Query: 9   L 7
           L
Sbjct: 82  L 82


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,037,737
Number of Sequences: 53049
Number of extensions: 224798
Number of successful extensions: 216
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)