Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0451
         (396 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   2.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   9.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   9.0  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 210 IFPPHYVLLRKRVSQLQLHD 151
           ++PP  +L+RK +S    +D
Sbjct: 366 MYPPASILMRKAISDYTFND 385


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 18  LY*NTVKNHFL*THLYFSLVKCSVPLT**YRCSPHYKL 131
           +Y NT+++H +     F L+K + PL+   R +   KL
Sbjct: 689 IYLNTMESHEVRCTAVFLLMKTNPPLSMLQRMAEFTKL 726


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 68  FVGKV*RAPNVIISVQSALQTHLL 139
           FVG   +   ++  ++  LQT+L+
Sbjct: 272 FVGSCRKTDQILYFIRGCLQTYLI 295


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 68  FVGKV*RAPNVIISVQSALQTHLL 139
           FVG   +   ++  ++  LQT+L+
Sbjct: 310 FVGSCRKTDQILYFIRGCLQTYLI 333


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,369
Number of Sequences: 438
Number of extensions: 1485
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)