Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0450
         (724 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CF1D1 Cluster: hypothetical protein TTHERM_0053...    36   0.77 
UniRef50_A2EDW5 Cluster: Putative uncharacterized protein; n=1; ...    35   2.3  
UniRef50_Q11M60 Cluster: Yop virulence translocation R; n=1; Mes...    34   4.1  
UniRef50_A1EX72 Cluster: Lipoprotein, putative; n=2; Coxiella bu...    34   4.1  
UniRef50_Q9FLI8 Cluster: Potassium/proton antiporter-like protei...    33   9.4  
UniRef50_Q7RC87 Cluster: Putative uncharacterized protein PY0589...    33   9.4  
UniRef50_Q55F69 Cluster: Glycosyltransferase; n=1; Dictyostelium...    33   9.4  

>UniRef50_UPI00006CF1D1 Cluster: hypothetical protein
           TTHERM_00538690; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00538690 - Tetrahymena
           thermophila SB210
          Length = 831

 Score = 36.3 bits (80), Expect = 0.77
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = +3

Query: 18  LQVIFKLFSLILTLNC*FSKR--QVSFLKKSDKERSLNENLSSQLFCTLNSINQINQ*DF 191
           LQ+I++ F L +  N  F++R  Q SFLKK          +S +L CT  S   +N    
Sbjct: 546 LQIIYRSFLLAIQQNSFFNQRLPQPSFLKKEQNFEFQLSRISRKLRCTQQSFFDVNYPLL 605

Query: 192 LTI*ITQIL 218
           L+  +T+IL
Sbjct: 606 LSFALTKIL 614


>UniRef50_A2EDW5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 530

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 18/71 (25%), Positives = 37/71 (52%)
 Frame = -2

Query: 321 TVLLNLNAVLPFLIYKTVISKAVFVSCLLNTSTIKVSVLFILLRNLIG*FDLYYLVYKRA 142
           T+L+N N ++PFL  + +IS   +++   N   +  S  F+ ++     F  Y+L  K  
Sbjct: 330 TILINQNNIIPFLFNEKLISDKCYIANRKNIKNVTESERFVQIQK--DDFSFYFLNLKEP 387

Query: 141 GMINFHSNFSP 109
            ++++  + SP
Sbjct: 388 TLVSYCLSGSP 398


>UniRef50_Q11M60 Cluster: Yop virulence translocation R; n=1;
           Mesorhizobium sp. BNC1|Rep: Yop virulence translocation
           R - Mesorhizobium sp. (strain BNC1)
          Length = 220

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 17/49 (34%), Positives = 30/49 (61%)
 Frame = -2

Query: 324 LTVLLNLNAVLPFLIYKTVISKAVFVSCLLNTSTIKVSVLFILLRNLIG 178
           +T + N  A+LP +I    +S   F+  ++ T+  K+S++ +LLRN IG
Sbjct: 1   MTAVENFPAILPTIIAVMALSFIPFI-VVMGTAFTKISIVLMLLRNAIG 48


>UniRef50_A1EX72 Cluster: Lipoprotein, putative; n=2; Coxiella
           burnetii|Rep: Lipoprotein, putative - Coxiella burnetii
           'MSU Goat Q177'
          Length = 304

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +3

Query: 366 SIVSLKRLKYFNTSKLGVLTSHALVPIVRFSISFLRGEVTLN*FQC 503
           +I+ L  LKY N +  G++TS     +V FSI FL+  VT++   C
Sbjct: 90  NILLLLGLKYTNANVAGIITSALPAIVVIFSIIFLKERVTISTLLC 135


>UniRef50_Q9FLI8 Cluster: Potassium/proton antiporter-like protein;
           n=12; Magnoliophyta|Rep: Potassium/proton
           antiporter-like protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 562

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 20/68 (29%), Positives = 36/68 (52%)
 Frame = -2

Query: 390 LDVLKTRWNLVHPISKCGASLSLTVLLNLNAVLPFLIYKTVISKAVFVSCLLNTSTIKVS 211
           L+   T+  +V P++  G  L + +L+ L  V   L+    +S+ +FV   L+ S+  V 
Sbjct: 221 LEFSMTKLKVVGPVAVLGGLLQIVLLMFLCGVTA-LLCGARLSEGIFVGAFLSMSSTAVV 279

Query: 210 VLFILLRN 187
           V F++ RN
Sbjct: 280 VKFLVERN 287


>UniRef50_Q7RC87 Cluster: Putative uncharacterized protein PY05897;
           n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05897 - Plasmodium yoelii yoelii
          Length = 658

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -2

Query: 240 LLNTSTIKVSVLFILLRNLIG*FDLYYLVYKRAGMI-NFHSNFSPCHFF 97
           L+N   IK S+ +IL  N+I   DL+  +YK   ++   + NF P +FF
Sbjct: 15  LINFFCIKKSIAYILNVNVIDKDDLFIFLYKNEQLLAASYYNFKPSYFF 63


>UniRef50_Q55F69 Cluster: Glycosyltransferase; n=1; Dictyostelium
           discoideum AX4|Rep: Glycosyltransferase - Dictyostelium
           discoideum AX4
          Length = 446

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -2

Query: 414 LILMY*SILDVLKTRWNLVHPISKCGASLSLTVLLNLNAVLPFLIYKT 271
           ++L Y S+  ++K RWNL      C  S+ + VLL   A+L FL+  T
Sbjct: 184 MLLFYISLYLIIKGRWNLGCLFFSCSVSVKMNVLLYSPALL-FLLLST 230


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,902,135
Number of Sequences: 1657284
Number of extensions: 10843711
Number of successful extensions: 20739
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20737
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)