Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0450
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    26   0.36 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.62 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 318  VLLNLNAVLPFLIYKTVISKAVFVSCLL 235
            +L NLN V+P +    VI  A+ V C+L
Sbjct: 1604 ILANLNLVVPVVAAVLVIIVAIIVICVL 1631


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = -2

Query: 315 LLNLNAVLPFLIYKTVISKAVFVSCLL--NTSTIKVSVLFILLRNLIG*FDLYYLVY 151
           +  L  +L F +   +I++ +FV C+L  +   + + +++I    +I   D++Y+ +
Sbjct: 239 IFGLGLLLMFAVSFLIITQVIFVICVLVQSEKIVWLHLVYISFLGIICAADVFYICH 295


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 475 PLRKEIEKRTIGTKACDVSTPNFDVLKY 392
           PLR  +EKR    +  D   P+FD+  Y
Sbjct: 81  PLRDAVEKRPPPDEPIDDYEPSFDLFYY 108


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -1

Query: 199 IVKKSYWLI*FILFSV 152
           ++K+SY +I F+LFS+
Sbjct: 142 LLKRSYLIISFVLFSL 157


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -1

Query: 199 IVKKSYWLI*FILFSV 152
           ++K+SY +I F+LFS+
Sbjct: 142 LLKRSYLIISFVLFSL 157


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 204 ITQIL*WYSY*VDTIQILLY 263
           IT ++ W+ Y +DT+ + ++
Sbjct: 283 ITAMVMWFGYVIDTMYLFIH 302


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 204 ITQIL*WYSY*VDTIQILLY 263
           IT ++ W+ Y +DT+ + ++
Sbjct: 239 ITAMVMWFGYVIDTMYLFIH 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,981
Number of Sequences: 336
Number of extensions: 3106
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)