Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0449
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51840| Best HMM Match : WD40 (HMM E-Value=8.3e-07) 62 3e-10
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30) 39 0.004
SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_40185| Best HMM Match : WD40 (HMM E-Value=0) 37 0.018
SB_36541| Best HMM Match : WD40 (HMM E-Value=0) 36 0.024
SB_46201| Best HMM Match : WD40 (HMM E-Value=0) 36 0.024
SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24) 36 0.031
SB_49036| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.041
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 36 0.041
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.054
SB_46905| Best HMM Match : WD40 (HMM E-Value=8.9e-12) 35 0.072
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 34 0.13
SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42) 34 0.13
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18) 33 0.17
SB_5842| Best HMM Match : WD40 (HMM E-Value=6.7e-21) 33 0.22
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 32 0.38
SB_48711| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41) 32 0.38
SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 32 0.38
SB_6741| Best HMM Match : WD40 (HMM E-Value=0) 32 0.38
SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42) 32 0.38
SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22) 32 0.51
SB_11065| Best HMM Match : WD40 (HMM E-Value=1.7e-35) 32 0.51
SB_43403| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_45648| Best HMM Match : WD40 (HMM E-Value=2.4e-14) 31 1.2
SB_30344| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 30 1.5
SB_50716| Best HMM Match : WD40 (HMM E-Value=0) 30 2.0
SB_32608| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_21896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24) 30 2.0
SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10) 29 2.7
SB_8765| Best HMM Match : WD40 (HMM E-Value=3.9e-15) 29 2.7
SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_58715| Best HMM Match : COLFI (HMM E-Value=0.011) 29 3.6
SB_1950| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_34704| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_13470| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_51840| Best HMM Match : WD40 (HMM E-Value=8.3e-07)
Length = 242
Score = 62.5 bits (145), Expect = 3e-10
Identities = 24/47 (51%), Positives = 38/47 (80%)
Frame = +3
Query: 513 DSKVXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQIH 653
+SKV + +WG LD+ ++TGHE G+L QWD+++G K+ SV+EH+ QI+
Sbjct: 12 NSKVTAGLWGPLDQFLVTGHENGELCQWDVKSGNKLISVQEHSKQIN 58
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWC 247
L+GH+ +T + +++ G L S A D K VW +G L T GH G C
Sbjct: 1260 LEGHEDRVTSLAFSKNGKRLVSVALDKKLKVWDVESGNLLDTLTGHDGYPVC 1311
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDAT--GS 265
L GH + + ++ + +FS ++D VW S G L +GH G + C+ + G
Sbjct: 1177 LSGHSKGVLTTCFSIDDRKIFSGSEDCTIRVWDSKTGALLAQLDGHAGAVTCVRVSPDGG 1236
Query: 266 QLISSXVVATV 298
+ SS T+
Sbjct: 1237 VIASSSADKTI 1247
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW 244
+L GH + + ++ +G LL S ++D VW E+L H W
Sbjct: 1453 LLGGHSDWVMDVAFSSDGALLTSGSRDRTVRVWDCAAAEKLKKARFHSERCW 1504
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +2
Query: 92 LQGHQRA-----ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFN 223
L GH+R + + ++ +G LL S DS +W GER TFN
Sbjct: 1362 LSGHERLRYDSLVWSVDFSPDGMLLASTGADSNVIIWDISTGERRYTFN 1410
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL--DATGS 265
L GH A+T ++ + +G ++ S++ D + W+ + E L + GH + L G
Sbjct: 1219 LDGHAGAVTCVRVSPDGGVIASSSADKTIRL-WNPSDEFLRSLEGHEDRVTSLAFSKNGK 1277
Query: 266 QLIS 277
+L+S
Sbjct: 1278 RLVS 1281
>SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30)
Length = 1292
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 86 LMLQGHQR---AITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH 229
LM+ H IT + +++ G LL + D NVW +L GER G GH
Sbjct: 190 LMMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGERAGVLAGH 240
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLETXKNIATLKSNS 357
+IT GD +C LWD+ET + I+T ++
Sbjct: 86 IITSSGDMTCALWDIETAQTISTYSGHT 113
>SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 89 MLQGHQ-RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGS 265
+L+GH IT ++++ G + S + D VW +L+G+ L T GH G +W +G
Sbjct: 313 ILKGHDDHVITCLQFS--GSRVVSGSDDGTLKVWSALSGKCLRTLTGHTGGVWSSQLSGH 370
Query: 266 QLISSXVVATV 298
++S T+
Sbjct: 371 IIVSGSTDRTL 381
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQL 271
LQGH + +++ +G + S + D+ VW + G+ L T GH + ++ + L
Sbjct: 475 LQGHTNRVYSLQF--DGTYIVSGSLDTSIRVWHAETGQCLHTLVGHQSLTSGMELRNNTL 532
Query: 272 ISSXVVATV 298
+S +TV
Sbjct: 533 VSGNADSTV 541
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQ 268
+L GH A+ +KY +G + S A D VW + + T GH ++ L G+
Sbjct: 434 VLVGHLAAVRCVKY--DGHRVVSGAYDFLVKVWDPETEQCIHTLQGHTNRVYSLQFDGTY 491
Query: 269 LISSXVVATV 298
++S + ++
Sbjct: 492 IVSGSLDTSI 501
>SB_40185| Best HMM Match : WD40 (HMM E-Value=0)
Length = 503
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 77 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW--CL 250
++ +L GH+ A+ + ++R G L S+ D++ VW G + GH ++ C
Sbjct: 260 VRTCLLSGHKAAVQSLAFSRNGRHLISSGVDTRLLVWDLAEGTLVAELKGHTDTVYSLCF 319
Query: 251 DATGSQLISS 280
G+ L S+
Sbjct: 320 SRDGTILASA 329
>SB_36541| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1070
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGS 265
++L+GH + +T + + L S +KDS +W GE GH + CL T +
Sbjct: 668 MVLRGHDKGVTALLIMNDCRHLVSGSKDSTIRLWDLTKGECKQVMQGHTNEVLCLSVTSN 727
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDA--TG 262
+ QGH + + ++ +G + S ++D VW L + GHGG+I CL A G
Sbjct: 374 VFQGHSKPVLCLQIINDGQAIVSGSEDKVLRVW-DLVSRDCVSLKGHGGLIKCLAAMHDG 432
Query: 263 SQLIS 277
+++S
Sbjct: 433 KRIVS 437
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 250
L +GH+ AI I + D + S + DS W NGE F GH + CL
Sbjct: 332 LEFRGHEGAINAILVTAK-DWVISGSDDSTVRAWDLENGESCAVFQGHSKPVLCL 385
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 250
L+GH I + +G + S AKD+ VW + E T GH +IW +
Sbjct: 416 LKGHGGLIKCLAAMHDGKRIVSGAKDNNIKVWDLVRLECQATLKGHTSLIWAI 468
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDAT--GS 265
L+GH I I +R+ ++ SA+KD VW + + T GH I C+ T G
Sbjct: 458 LKGHTSLIWAIAVSRDDSVIVSASKDDLLKVWRTESWVCTQTLIGHSSWISCVAMTTDGK 517
Query: 266 QLIS 277
+IS
Sbjct: 518 TIIS 521
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 241 MVP*RDWQSINLITXGGDSSCRLWDLETXKNIATLKSNSSVRTC 372
+V +DW +I+ DS+ R WDLE ++ A + +S C
Sbjct: 345 LVTAKDW----VISGSDDSTVRAWDLENGESCAVFQGHSKPVLC 384
>SB_46201| Best HMM Match : WD40 (HMM E-Value=0)
Length = 292
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 116 TQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATG 262
T I + D+L + + D+ W + E + TF GH G I CL G
Sbjct: 159 TYIDLDNNDDILVTGSADNTAKAWGMNSNECMNTFKGHEGAILCLAVDG 207
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQLI 274
+GH+ AI + + +G LLF+ + DS W L +F GH + C+ +
Sbjct: 194 KGHEGAILCLAVDGKGRLLFTGSSDSTIRSWDLHTYSPLKSFKGHSASVICIQVVNKLMY 253
Query: 275 SS 280
SS
Sbjct: 254 SS 255
>SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24)
Length = 208
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 80 KPLM-LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW 244
+PL+ + GHQ I Q+ ++ +G L+ SAA D +W G+ + + GH ++
Sbjct: 50 EPLVRMTGHQALINQVCFSPDGRLIASAAFDKSVKLWNGETGKFITSLRGHVNCVY 105
>SB_49036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 35.5 bits (78), Expect = 0.041
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLETXKNIATLKSNSSVRTCNFSYXAYQAAYTTDK--AMGHXXXVFV 447
+ T GGDSS RLW L+ N T+ + ++ + N S + T + AM H + V
Sbjct: 92 IATGGGDSSIRLWSLQDLSNGLTISTETAAPSANASLPVTKDGVDTPRSVAMIHDCNLLV 151
Query: 448 IDT 456
+ T
Sbjct: 152 MTT 154
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 DLLFSAAKDSKPNVWWSLNGERLGTFNGH-GGVIWCL 250
D++ S +D+ NVW + +G L TF GH G IW L
Sbjct: 48 DVIVSIGEDAACNVW-NYDGRLLKTFTGHKGKSIWSL 83
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 35.5 bits (78), Expect = 0.041
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREG-DLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQ 268
L GH+ IT++K + D++ S A + VW GE L GH I + +T +
Sbjct: 3202 LHGHRDGITELKVDSNNPDIVISGASNGGVRVWDLSTGECLQHLRGHTCAITTVASTHAH 3261
Query: 269 LIS 277
LIS
Sbjct: 3262 LIS 3264
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 35.1 bits (77), Expect = 0.054
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQL 271
L GH I + +G + S+ D++ VW +GE L + +GH + + + L
Sbjct: 912 LVGHTSDIFAVAVTPDGSKVISSGDDTQVKVWSLESGEELASLHGHSESVRIVTVSPDGL 971
Query: 272 ISSXVVATVPAGYGIWRXA 328
+ V + A + IWR A
Sbjct: 972 --TIVSGSEDATFKIWRIA 988
Score = 34.7 bits (76), Expect = 0.072
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLETXKNIATLKSNSS-VRTCNFSYXAYQAAYTTDKAMGHXXXVFVI 450
+IT G D S R+WD ET K + L ++ V T S A + A H ++ +
Sbjct: 721 IITGGADGSIRVWDYETGKELNKLLDHTKLVYTLALS---PHADFLVSGAFDHTVKIWDM 777
Query: 451 DTRTIDETVSG 483
DT ++ T+ G
Sbjct: 778 DTLSLVHTLKG 788
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 98 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH 229
GH+R I I ++ GD + + DS VW L TF+GH
Sbjct: 998 GHKRTINGIALSKNGDFCVTGSDDSLVKVWDGKIYSELMTFSGH 1041
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 558 IITGHEAGDLIQWDLRTGKKIHSVKEHTHQIHRYA 662
IITG G + WD TGK+++ + +HT ++ A
Sbjct: 721 IITGGADGSIRVWDYETGKELNKLLDHTKLVYTLA 755
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 250
L GH + I +G L SA++D +W + T GH ++C+
Sbjct: 828 LDGHDGHVRGIAITSDGRRLVSASQDRTLRIWNLETFAHVSTLRGHSETVYCV 880
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLETXKNIATLKSNSSVRTC 372
L++ D + R+W+LET +++TL+ +S C
Sbjct: 847 LVSASQDRTLRIWNLETFAHVSTLRGHSETVYC 879
>SB_46905| Best HMM Match : WD40 (HMM E-Value=8.9e-12)
Length = 340
Score = 34.7 bits (76), Expect = 0.072
Identities = 21/85 (24%), Positives = 34/85 (40%)
Frame = +2
Query: 65 YFLNMKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW 244
+ N L GH + +T + +G +L S + D+ VW + + + T G V
Sbjct: 160 HITNEGALNFTGHSKQVTSLAVTMDGTVLLSGSNDNTARVWHIQSRQSIRTLTHKGAV-- 217
Query: 245 CLDATGSQLISSXVVATVPAGYGIW 319
T Q+I V T P +W
Sbjct: 218 ----TNVQIIRRPVNFTDPLSRNLW 238
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 101 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWC--LDATGSQLI 274
H A+ K++ + + S D+ VW S +G +L + +GHG V+ C S++I
Sbjct: 509 HCGAVYCCKFSSDSSKVVSCGTDNHVKVWDSQSGRQLLSISGHGDVVNCCAFSHDDSRII 568
Query: 275 SSXVVATV 298
S TV
Sbjct: 569 SCSADQTV 576
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/53 (26%), Positives = 31/53 (58%)
Frame = +3
Query: 513 DSKVXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQIHRYATFS 671
DSK+ S+ + E I G E+G + ++L+ + ++++ HT+++ R F+
Sbjct: 842 DSKIHSVTFSPRGEAIAVGCESGTISVFNLQEARVMYTLAGHTNKLRRCMFFN 894
>SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42)
Length = 383
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH 229
L+GH++AI ++ +G L + + D +W GE L T GH
Sbjct: 47 LEGHKKAILNVEVGPDGKTLATCSADCTVGLWNITTGELLRTLVGH 92
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTF-NGHGGVIWCL 250
L+GHQ A+ + ++ + +FS + D +W + + T + GG + CL
Sbjct: 184 LRGHQGAVNVVAFSLDNRYIFSGSDDKSIRIWSRESSKCENTLTDSLGGEVRCL 237
>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
Length = 1764
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHG---GVIWCLDATG 262
L GH + + + +G + S ++D VW + +G L T G G I C D+
Sbjct: 1055 LVGHSKGVYGLAVTADGSCVVSGSEDGSVKVWSANDGSILVTIEDMGEGIGAIQCADSDR 1114
Query: 263 SQLISSXVVATV 298
++SS TV
Sbjct: 1115 CAVVSSTKGITV 1126
>SB_5842| Best HMM Match : WD40 (HMM E-Value=6.7e-21)
Length = 759
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 98 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTF 220
GH +A+ + +N +G SA D +W + GE LG +
Sbjct: 131 GHSKAVRDVSFNNDGTQFLSAGYDRYVKLWDTETGECLGRY 171
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGV 238
+L H + I ++ +G L S + D + ++W + G + +F G GG+
Sbjct: 328 VLSKHHEPVYTISFSPDGRYLASGSFDKRVHIWSTQTGNLVHSFQGSGGI 377
>SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 243
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG---TFNGHGGVIWCLDATGS 265
+GH + I+ +++ + + S + D VW L+ E T GH G + CL+ G+
Sbjct: 23 EGHTQGISCVQF--DDTRIVSGSSDKTIKVW-DLSREDTSAVLTLAGHSGTVRCLNLNGN 79
Query: 266 QLISSXV 286
+L+S V
Sbjct: 80 RLVSGSV 86
>SB_48711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI 241
+GH+ I + +G L S KD +W + + TF GH VI
Sbjct: 111 KGHKEQILALAITTDGKYLASGGKDKLIRIWDPDTSKHIHTFKGHRDVI 159
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDA 256
+GH+ I+ + + R LFSA+ D +W + T GH + +D+
Sbjct: 153 KGHRDVISGLAFRRGSHQLFSASHDKTVKIWNLDEMAYVETLFGHQDAVTGIDS 206
>SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)
Length = 1487
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL--DAT 259
L QGH + + Y+ +G+ + + D K +W ++ G TF+ H + +
Sbjct: 1245 LKQQGHYYDMNVLAYSPDGNYIATGGDDGKVKLWNTMTGFCFVTFHEHSASVTAVTFSPN 1304
Query: 260 GSQLISSXVVATVPA 304
G ++S+ + TV A
Sbjct: 1305 GQVVLSASLDGTVRA 1319
>SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 870
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG---TFNGHGGVIWCLDATGS 265
+GH + I+ +++ + + S + D VW L+ E T GH G + CL+ G+
Sbjct: 650 EGHTQGISCVQF--DDTRIVSGSSDKTIKVW-DLSREDTSAVLTLAGHSGTVRCLNLNGN 706
Query: 266 QLISSXV 286
+L+S V
Sbjct: 707 RLVSGSV 713
>SB_6741| Best HMM Match : WD40 (HMM E-Value=0)
Length = 714
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLETXKNIATLKSNS-SVRTCNFS 381
+ T DS+ LW+LET + +A L+ ++ +VR C FS
Sbjct: 71 MATASTDSTLMLWNLETGECLAVLEGHTGAVRVCRFS 107
>SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42)
Length = 198
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLETXKNIATLKSNS-SVRTCNFS 381
+ T DS+ LW+LET + +A L+ ++ +VR C FS
Sbjct: 71 MATASTDSTLMLWNLETGECLAVLEGHTGAVRVCRFS 107
>SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 945
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDAT 259
L+LQGH+ A++ +++ + + S + D +W +G+ L T GH + + T
Sbjct: 636 LVLQGHEGAVSCLEF--DAPFVLSGSADKTIKLWNVESGDCLNTLRGHADAVTSVKVT 691
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQ 268
+L GH+ ++ ++++ + L S + DS VW E + GH G + CL+
Sbjct: 597 VLYGHKGCVSCLRFDE--NTLVSGSHDSTIRVWDMRTWECVLVLQGHEGAVSCLEFDAPF 654
Query: 269 LISSXVVATV 298
++S T+
Sbjct: 655 VLSGSADKTI 664
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQL 271
++GH+ + ++++ E + S + D VW + RL GH G + CL + L
Sbjct: 558 MKGHKGGVRCLQFDNER--IISGSWDMTIMVWHIVKFTRLHVLYGHKGCVSCLRFDENTL 615
Query: 272 ISSXVVATVPA-GYGIWRXARILQ 340
+S +T+ W +LQ
Sbjct: 616 VSGSHDSTIRVWDMRTWECVLVLQ 639
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQL 271
LQGH + ++++R + + + D +W +G + GH G + CL ++
Sbjct: 518 LQGHMDVVLCLQFDRRR--VVTGSSDRTIRMWDVRSGRSIRKMKGHKGGVRCLQFDNERI 575
Query: 272 IS 277
IS
Sbjct: 576 IS 577
>SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22)
Length = 442
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGG 235
+++ H + + +NR+G L + +KD K + +G+ + NGH G
Sbjct: 103 IIENHTAIVYSVSWNRDGSLFTTTSKDKKLRLVDPRSGKIVKEVNGHEG 151
>SB_11065| Best HMM Match : WD40 (HMM E-Value=1.7e-35)
Length = 702
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 104 QRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 253
Q I + ++ G ++ SA++D +W L GE+L T GH + +D
Sbjct: 538 QAEIWSVCWSPCGGMVASASEDQTTCIWSVLTGEKLHTLRGHTTAVTSVD 587
Score = 31.1 bits (67), Expect = 0.89
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +3
Query: 504 GNTDSKVXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHT 641
G +++ S+ W + + E W + TG+K+H+++ HT
Sbjct: 535 GQRQAEIWSVCWSPCGGMVASASEDQTTCIWSVLTGEKLHTLRGHT 580
>SB_43403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Frame = +3
Query: 534 IWGSLD---ETIITGHEAGD--LIQWDLRTGKKIHSVKEHTHQI 650
IWG+ D E ITGH+ D + WD++TGK + ++ H+ +
Sbjct: 59 IWGAYDGKFEKTITGHKLFDESVRIWDVKTGKCLKTLPAHSDPV 102
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 113 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGS 265
++ +K++ G + +A D+ +W G+ L T+ GH +C+ A S
Sbjct: 125 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCVFANFS 175
>SB_45648| Best HMM Match : WD40 (HMM E-Value=2.4e-14)
Length = 316
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 80 KPL-MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH 229
KP+ + +GH++A++ K+ +++ SA+ DS+ +W L TF GH
Sbjct: 137 KPINVFKGHRKAVSYTKFINSTEIV-SASTDSQLKLWNINKPHCLRTFKGH 186
>SB_30344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 187
L GH+ A+ + ++R G+ L S+ D +W
Sbjct: 386 LTGHEDAVQSVLFDRAGEFLLSSGSDGTVRIW 417
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGH 229
L H A+ ++ +GD L S + D+ + W LN ER T GH
Sbjct: 239 LTFADHTHAVWGCTWHSKGDFLASCSMDNTSKI-WDLNSERCRYTLRGH 286
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Frame = +2
Query: 77 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL-- 250
+K +++GH ++ ++ + + +A+ D +W + +G +L + GH +I
Sbjct: 30 VKIKVMRGHTDSVNSCRFCFDDAKIVTASHDKTIRLWDASSGNQLKVYTGHTSIITSCHP 89
Query: 251 DATGSQLIS-----SXVVATVPAGYGIWR 322
+ T +LIS + ++ V G +W+
Sbjct: 90 NTTSRKLISGGWDKTLIMWDVETGCALWQ 118
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 265 SINLITXGGDSSCRLWDLETXKNIATLKSNSSVRTCNFS 381
S LI+ G D + +WD+ET + V TC+FS
Sbjct: 93 SRKLISGGWDKTLIMWDVETGCALWQAVQEGIVTTCHFS 131
>SB_50716| Best HMM Match : WD40 (HMM E-Value=0)
Length = 494
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQ 268
+L GH+ A+ + ++ + + SA+ D VW + E + T NGH I CL
Sbjct: 308 VLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHRRGIACLQYRDRL 365
Query: 269 LIS 277
++S
Sbjct: 366 VVS 368
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQL 271
L GH+R I ++Y L+ S + D+ +W G L GH ++ C+ ++
Sbjct: 349 LNGHRRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 406
Query: 272 IS 277
+S
Sbjct: 407 VS 408
>SB_32608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 909
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/43 (25%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW--WSLNGER 208
++L GH+ + Q+++N ++ SA + VW W + G++
Sbjct: 148 MVLSGHRSIVNQVRFNPTTHMIISAGVEKIIKVWSPWEVYGDK 190
>SB_21896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +2
Query: 155 SAAKDSKPNVWWSLNGERLGTFN---GHGGVIWCLDATGSQLIS 277
S KDSKP+ WWS N +R+ N G G +I L G +S
Sbjct: 396 SHLKDSKPSQWWS-NVKRIAGINPASGSGDLISTLQVEGFDRLS 438
>SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQ 268
L+ H ++ + + E + SA+ D VW + + + T GH + +D +G++
Sbjct: 83 LKEHDNVVSSVSVDCEKSRIISASWDRSIKVWDLTSEQCIRTLKGHSDFVLGVDCSGTE 141
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 256 DWQSINLITXGGDSSCRLWDLETXKNIATLKSNS 357
D + +I+ D S ++WDL + + I TLK +S
Sbjct: 96 DCEKSRIISASWDRSIKVWDLTSEQCIRTLKGHS 129
>SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24)
Length = 515
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 77 MKPLMLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWS 193
+K L GHQ + + +N R+ D+L SA+ D VW S
Sbjct: 468 VKLATLTGHQNVVNCVAFNPRDPDMLVSASDDHTLRVWKS 507
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 146 LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 250
L+ S A+DS +VW G +L T GH V+ C+
Sbjct: 449 LVASGAEDSCAHVWDRHFGVKLATLTGHQNVVNCV 483
>SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10)
Length = 345
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 519 KVXSMIWGSLDETIITGHEAGD--LIQWDLRTGKKIHSVKEHTHQIH 653
KV SM W +++ + D + WD+RTG+ ++S H+ I+
Sbjct: 227 KVLSMDWSGDCRHLVSSSQGCDRAALIWDIRTGRIVNSFASHSADIN 273
>SB_8765| Best HMM Match : WD40 (HMM E-Value=3.9e-15)
Length = 481
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 80 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 187
KP+ + H+ + +I +N +L+ S +D K VW
Sbjct: 43 KPIQWKAHEGIVLKIDWNPINNLILSGGEDCKYKVW 78
>SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 513 DSKVXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHT 641
DS V S+ +++GHE G + +D+ G+ + K HT
Sbjct: 1188 DSCVSSVCVNPSGTLLVSGHEDGGCMLYDITAGRTLQFFKPHT 1230
>SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/67 (20%), Positives = 32/67 (47%)
Frame = +2
Query: 74 NMKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 253
++K + QR + ++ + L +A+ D+ +W GE + ++GH + CL
Sbjct: 231 SLKTTLSDTSQRWVWDCAFSEDSQYLVTASSDNLARLWNVEAGEVVREYSGHQKAVVCLA 290
Query: 254 ATGSQLI 274
+Q++
Sbjct: 291 FKDAQVM 297
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 89 MLQGHQRAITQIKY-NREGDLLFSAAKDSKPNVW 187
+L+GH R I I + ++ DLL S AKD++ W
Sbjct: 256 VLEGHSRGILSIAWCPQDPDLLMSCAKDNRILCW 289
>SB_58715| Best HMM Match : COLFI (HMM E-Value=0.011)
Length = 280
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/67 (23%), Positives = 25/67 (37%)
Frame = +2
Query: 122 IKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQLISSXVVATVP 301
IKY +G L+ D N W S +G+ + + G C G +
Sbjct: 175 IKYKCKGSSLYYPRDDYWDNWWVSRDGKNMTSLGAPAGSGKCACGVGGACANPDFPCNCS 234
Query: 302 AGYGIWR 322
+ G+WR
Sbjct: 235 SNDGVWR 241
>SB_1950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 182 VWWSLNGERLGTFNGHGGVIWCLDATGSQLISS 280
VW + GE T +GH G ++CL A ++I+S
Sbjct: 280 VWSAHTGECTATLSGHTGEVYCL-AFNDEIIAS 311
>SB_34704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 146 LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI 241
L + A DS +W + +G L T GH G +
Sbjct: 3 LCYKGADDSLVKIWSTKDGRLLATLRGHNGEV 34
>SB_13470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1483
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 77 MKPL-MLQG-HQRAITQIKYNREGDLLFSAAKDSKPN--VWWSLNGERLGTFNGHGGVIW 244
MK L +L+G H+R + + ++ +G L S D VW GE+L T GH I+
Sbjct: 513 MKTLSILKGQHERGVCAVDFSGDGRKLASVGLDDNHCIVVWDWKKGEKLATTRGHKDKIF 572
Query: 245 CL 250
+
Sbjct: 573 VI 574
>SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1189
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 155 SAAKDSKPNVWWSLNGERLGT 217
+A + KPNV+WS NG ++G+
Sbjct: 406 TADGNPKPNVYWSKNGYKIGS 426
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,412,520
Number of Sequences: 59808
Number of extensions: 468629
Number of successful extensions: 1325
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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