BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= prgv0449 (692 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 0.52 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.8 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.8 DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 22 6.4 DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 22 6.4 >AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein protein. Length = 1308 Score = 25.4 bits (53), Expect = 0.52 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = +3 Query: 105 SVPSHRSNITARVTCSSPPLKIQNQ 179 S S+ +N+T +T PP+K+Q+Q Sbjct: 951 SSASNVTNVTTNLTTILPPVKVQSQ 975 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 22.2 bits (45), Expect = 4.8 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 155 SAAKDSKPNVWWSLNGERLGTFNG 226 SAA + P V W+L+G L T NG Sbjct: 444 SAAGNPTPQVTWALDGFALPT-NG 466 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 22.2 bits (45), Expect = 4.8 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 155 SAAKDSKPNVWWSLNGERLGTFNG 226 SAA + P V W+L+G L T NG Sbjct: 444 SAAGNPTPQVTWALDGFALPT-NG 466 >DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant 2 precursor protein. Length = 94 Score = 21.8 bits (44), Expect = 6.4 Identities = 8/22 (36%), Positives = 12/22 (54%) Frame = +3 Query: 336 CNTQIQLFCKNMQLQLXCISSC 401 C+ + Q FC N+ + CI C Sbjct: 46 CDGRCQRFCPNVVPKPLCIKIC 67 >DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant 1 precursor protein. Length = 92 Score = 21.8 bits (44), Expect = 6.4 Identities = 8/22 (36%), Positives = 12/22 (54%) Frame = +3 Query: 336 CNTQIQLFCKNMQLQLXCISSC 401 C+ + Q FC N+ + CI C Sbjct: 46 CDGRCQRFCPNVVPKPLCIKIC 67 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 195,676 Number of Sequences: 438 Number of extensions: 3894 Number of successful extensions: 7 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21195810 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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