Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0449
(692 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 93 1e-19
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 93 1e-19
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 93 1e-19
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 92 3e-19
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 50 1e-06
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 48 4e-06
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 47 1e-05
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 47 1e-05
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 41 7e-04
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 38 0.005
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 38 0.006
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 38 0.008
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 37 0.011
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 37 0.011
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 37 0.015
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 36 0.019
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 36 0.034
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 35 0.045
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 35 0.045
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 34 0.078
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 34 0.078
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 34 0.078
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 34 0.078
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 34 0.078
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 34 0.078
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 34 0.10
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 34 0.10
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 33 0.14
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 33 0.14
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 33 0.14
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 33 0.14
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 33 0.14
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 33 0.24
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 32 0.31
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 32 0.31
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 32 0.41
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 31 0.55
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 31 0.55
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 31 0.55
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 31 0.55
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 31 0.73
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 31 0.73
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 31 0.73
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 31 0.73
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 31 0.73
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 31 0.96
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 31 0.96
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 31 0.96
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 31 0.96
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 31 0.96
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 31 0.96
At5g05570.1 68418.m00605 transducin family protein / WD-40 repea... 30 1.3
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 30 1.3
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 30 1.3
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 30 1.7
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 30 1.7
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 30 1.7
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 30 1.7
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 30 1.7
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 30 1.7
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 30 1.7
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 30 1.7
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 29 2.2
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 29 2.2
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 29 2.9
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 29 2.9
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 29 2.9
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 29 2.9
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 29 2.9
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 29 2.9
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 29 2.9
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 29 3.9
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 29 3.9
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 29 3.9
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 29 3.9
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 29 3.9
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 29 3.9
At3g02740.1 68416.m00266 aspartyl protease family protein contai... 29 3.9
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 29 3.9
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 29 3.9
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 29 3.9
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 29 3.9
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 28 5.1
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 28 5.1
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 28 6.8
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 28 6.8
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 28 6.8
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 28 6.8
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 28 6.8
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 27 8.9
At5g18000.1 68418.m02111 transcriptional factor B3 family protei... 27 8.9
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 27 8.9
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 27 8.9
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 27 8.9
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 27 8.9
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 27 8.9
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 27 8.9
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 27 8.9
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 93.5 bits (222), Expect = 1e-19
Identities = 37/69 (53%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
Frame = +2
Query: 77 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDA 256
M+P++++GH+R +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G +WC D
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 257 T--GSQLIS 277
+ S+LI+
Sbjct: 61 SRDSSRLIT 69
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +1
Query: 232 WCNMVP*RDWQSINLITXGGDSSCRLWDLETXKNIATLKSNSSVRTCNFSYXAYQAAYTT 411
WC V RD S LIT D + +LWD+++ K + T K N+ R+ +F+ A TT
Sbjct: 56 WCCDVS-RD--SSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITT 112
Query: 412 D 414
D
Sbjct: 113 D 113
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 519 KVXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKE 635
++ +WG L++TI++G E + WD TGK + E
Sbjct: 150 RINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDE 188
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 93.5 bits (222), Expect = 1e-19
Identities = 37/69 (53%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
Frame = +2
Query: 77 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDA 256
M+P++++GH+R +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G +WC D
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 257 T--GSQLIS 277
+ S+LI+
Sbjct: 61 SRDSSRLIT 69
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +1
Query: 232 WCNMVP*RDWQSINLITXGGDSSCRLWDLETXKNIATLKSNSSVRTCNFSYXAYQAAYTT 411
WC V RD S LIT D + +LWD+++ K + T K N+ R+ +F+ A TT
Sbjct: 56 WCCDVS-RD--SSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITT 112
Query: 412 D 414
D
Sbjct: 113 D 113
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 519 KVXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKE 635
++ +WG L++TI++G E + WD TGK + E
Sbjct: 150 RINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDE 188
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 93.5 bits (222), Expect = 1e-19
Identities = 37/69 (53%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
Frame = +2
Query: 77 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDA 256
M+P++++GH+R +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G +WC D
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 257 T--GSQLIS 277
+ S+LI+
Sbjct: 61 SRDSSRLIT 69
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +1
Query: 232 WCNMVP*RDWQSINLITXGGDSSCRLWDLETXKNIATLKSNSSVRTCNFSYXAYQAAYTT 411
WC V RD S LIT D + +LWD+++ K + T K N+ R+ +F+ A TT
Sbjct: 56 WCCDVS-RD--SSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITT 112
Query: 412 D 414
D
Sbjct: 113 D 113
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 519 KVXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKE 635
++ +WG L++TI++G E + WD TGK + E
Sbjct: 150 RINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDE 188
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 92.3 bits (219), Expect = 3e-19
Identities = 37/69 (53%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Frame = +2
Query: 77 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDA 256
M+P++++GH+R +T ++YNR GDLLFS AKD P VW++ NGERLGT+ GH G +WC D
Sbjct: 28 MRPILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDI 87
Query: 257 T--GSQLIS 277
+ S+LI+
Sbjct: 88 SRDSSRLIT 96
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +1
Query: 232 WCNMVP*RDWQSINLITXGGDSSCRLWDLETXKNIATLKSNSSVRTCNFSYXAYQAAYTT 411
WC + RD S LIT D + +LWD+++ K + T K + R+ +FS + A TT
Sbjct: 83 WCCDIS-RD--SSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITT 139
Query: 412 DKAMGHXXXVFV 447
D +G + V
Sbjct: 140 DHFVGTSSAIHV 151
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 519 KVXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKE 635
K+ +WG L++TI++G E + WD TGK + E
Sbjct: 177 KINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDE 215
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Frame = +2
Query: 83 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW--C 247
PL+ GH R + + Y+ +G L SA+KDS+P + G+ +GTF GH G +W C
Sbjct: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 248 LD 253
LD
Sbjct: 69 LD 70
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +2
Query: 83 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW 244
PL+ GH R + + Y+ +G L SA+KDS P + G+ +GTF GH G +W
Sbjct: 4 PLVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVW 60
Score = 34.3 bits (75), Expect = 0.078
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +3
Query: 498 KMGNTDSKVXSMIWGSLDETIITG-HEAGDLIQWDLRTGKKIHSVK 632
++GN+ + ++ W D TI++ + GD+ WD+R+ K +H+++
Sbjct: 135 EVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTLE 180
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +2
Query: 83 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW--C 247
P + GH R + + Y+ +G L SA+KDS P + G+ +GTF GH G +W C
Sbjct: 9 PQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 248 LD 253
LD
Sbjct: 69 LD 70
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +2
Query: 83 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW--C 247
P + GH R + + Y+ +G L SA+KDS P + G+ +GTF GH G +W C
Sbjct: 9 PQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 248 LD 253
LD
Sbjct: 69 LD 70
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQL 271
L GHQ+ +T I D L++A+KD +W +G+ G N GG + C+ + G L
Sbjct: 140 LDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLN-LGGEVGCIISEGPWL 198
Query: 272 I 274
+
Sbjct: 199 L 199
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 10/73 (13%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSL--NGE-----RLG-TFNGHGGVIW 244
+L GH + + ++++ D+LFS + D+ VWWS +GE LG + NGH +W
Sbjct: 158 VLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVW 217
Query: 245 CL--DATGSQLIS 277
+ +A G ++++
Sbjct: 218 SISFNAAGDKMVT 230
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 113 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL--DATGSQLISSXV 286
+T + +N EG LL + + D + +W +LNGE + T + H G I+ L + G L++ V
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSV 385
Query: 287 VAT 295
T
Sbjct: 386 DRT 388
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/59 (22%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 98 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI-WCLDATGSQL 271
GH+ + + ++ G+ + S + D ++W G+ + T+ G+GG+ C + G+++
Sbjct: 539 GHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVCWNKEGNKI 597
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 98 GHQRAITQIKYNREGDLLFSAAKDSKPNVW 187
GHQ + +K++ G LL S + DS +W
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIW 475
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGG 235
L H+ I +K+N++GD L + + D VW E F H G
Sbjct: 361 LSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSG 408
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW 244
L GHQ+ + + ++ +G + SA+ D +W + G+ + F GH G ++
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVY 406
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHG 232
+ L GH A+T +K+ +G ++++ ++D +W + G+ + GHG
Sbjct: 235 ICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHG 282
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 253
+ +GH + Q+ ++ + LL S +KDS +W + GH ++ +D
Sbjct: 397 VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVD 451
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 537 WGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQIHRYA 662
WG D I TG + + W+ GK I +K H H I+ A
Sbjct: 249 WGG-DGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLA 289
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--AT 259
L QGH + + Y+ + LL + A D+K VW ++G TF H + L A
Sbjct: 343 LKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMAD 402
Query: 260 GSQLISSXVVATVPAGYGIWRXARILQHSNPT 355
L+S+ + TV A + R ++ PT
Sbjct: 403 NHSLLSASLDGTVRA-WDFKRYKNYKTYTTPT 433
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--AT 259
L QGH + + Y+ + LL + A D+K VW ++G TF H + L A
Sbjct: 383 LKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMAD 442
Query: 260 GSQLISSXVVATVPAGYGIWRXARILQHSNPT 355
L+S+ + TV A + R ++ PT
Sbjct: 443 NHSLLSASLDGTVRA-WDFKRYKNYKTYTTPT 473
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 101 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 250
H ++ +K+ R LFS KD W + E L T GH IWCL
Sbjct: 623 HGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCL 672
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 101 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH 229
H+ A+T ++YN+ G +L S +KD+ +W + L GH
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGH 147
Score = 31.5 bits (68), Expect = 0.55
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 253
L+GH+ +T + + G L S++KD VW + +GH +W +D
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVD 197
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFN-GHGGVIWC 247
L+GHQ + + +N G LL S + D + N+W + + L + + GH I+C
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFC 98
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 35.5 bits (78), Expect = 0.034
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH 229
L+ +GH R++ I + ++G L S DS VW G + F GH
Sbjct: 375 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGH 422
Score = 35.1 bits (77), Expect = 0.045
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 89 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGS 265
++ H ++Q+KY +EG L +A+ D K N+W + + + GH + LD T
Sbjct: 460 IIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITA- 518
Query: 266 QLISSXVVATV 298
S +ATV
Sbjct: 519 ---DSSCIATV 526
Score = 28.7 bits (61), Expect = 3.9
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +1
Query: 271 NLITXGGDSSCRLWDLETXKNIATLKSNSSV 363
+L + G D+ CR+WDL K++ + +++++
Sbjct: 437 HLASGGEDNQCRIWDLRMRKSLYIIPAHANL 467
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 253
+GH R + +++ +G + S +D+ VW G+ L F H G I LD
Sbjct: 233 KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLD 285
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 558 IITGHEAGDLIQWDLRTGKKIHSVKEHTHQI 650
I++G E + WDL GK +H K H +I
Sbjct: 251 IVSGGEDNVVKVWDLTAGKLLHEFKSHEGKI 281
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 35.1 bits (77), Expect = 0.045
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGT 217
M++ H I+ + +NR+G L+ SA+ D +W + G L T
Sbjct: 165 MIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKT 207
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 34.3 bits (75), Expect = 0.078
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 253
+GH R + +++ +G + S +D+ VW G+ L F H G I LD
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLD 192
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 34.3 bits (75), Expect = 0.078
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 253
+GH R + +++ +G + S +D+ VW G+ L F H G I LD
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLD 192
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 34.3 bits (75), Expect = 0.078
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH 229
L+GH+R I ++++ + +A+ D +W +G L TF GH
Sbjct: 537 LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGH 582
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL----DATG 262
+GH+ + + + G LL +A D K VW G F GH GV+ + D+
Sbjct: 99 KGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNK 158
Query: 263 SQLISSXVVATV 298
+ LIS ATV
Sbjct: 159 NILISGSDDATV 170
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 187
+++ H A+T I + +G LFSA +D N+W
Sbjct: 187 IMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/52 (21%), Positives = 22/52 (42%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 250
+GH ++ + + +G S D +W E + T++ H +W L
Sbjct: 580 EGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWAL 631
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 34.3 bits (75), Expect = 0.078
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGERLGTFNGH 229
L GH+ + +++N GD+L S + D + +W W +L +GH
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGH 97
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 34.3 bits (75), Expect = 0.078
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE--RLGTFNGHGGVIWCLDAT 259
++L GH A+ +K+N G L+ S + D + W ++G+ GH I L T
Sbjct: 47 MLLSGHPSAVYTMKFNPAGTLIASGSHD-REIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 260 --GSQLISSXVVATVPA 304
GSQ++S+ TV A
Sbjct: 106 SDGSQIVSASPDKTVRA 122
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 113 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI--WCLDATGSQLISS 280
IT + ++ D +F+ D+ VW GE T GH I L GS L+++
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTN 240
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLETXKNIATLKSNSS-VRTC 372
+++ D + R WD+ET K I + +SS V +C
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSC 144
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 187
+ L+GHQ IT + + +G L + D+K VW
Sbjct: 216 MTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVW 249
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 522 VXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHT 641
+ + W S I++ + WD+ TGK+I + EH+
Sbjct: 99 ILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHS 138
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 34.3 bits (75), Expect = 0.078
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 253
+GH R I+ I++ +G + S D+ VW G+ L F H G I LD
Sbjct: 139 KGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLD 191
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHG 232
+L+GH+ A+ ++N +G+ + KD +W G + T+ HG
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHG 60
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 253
+GH R I+ I+++ +G + S D+ VW G+ L F H G I LD
Sbjct: 88 KGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLD 140
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +2
Query: 98 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH 229
GH+ + ++++ G+ L S + D+ VW + + T+ GH
Sbjct: 47 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGH 90
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQL 271
L GH++ ++ I D L++ +KD VW +G+ G GG I C+ + G L
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLK-LGGEIGCVLSEGPWL 205
Query: 272 I 274
+
Sbjct: 206 L 206
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH 229
L GH+ + +K+N+ G+ L +A+KD ++ + L +F GH
Sbjct: 306 LHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGH 351
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +2
Query: 98 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI 241
GH + + ++ LL S KD +W + +G L + +GH ++
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIV 313
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWC 247
+L GHQR + ++ +G+ L +A+ D +W G+ + + GH C
Sbjct: 248 VLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVC 300
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 513 DSKVXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQIHRYA 662
DS V S++ D +ITG + WDLR GK + ++ H + A
Sbjct: 295 DSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMA 344
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLETXKNIATLKSNSSV 363
++T G DS CR+WD+ T I L +S V
Sbjct: 269 VLTGGRDSVCRVWDIRTKMQIFVLPHDSDV 298
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 250
L L GH + + + +FSA D + W + + +++GH ++CL
Sbjct: 206 LTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCL 260
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 513 DSKVXSMIWGSLDETII-TGHEAGDLIQWDLRTGKKIHSVKEHTHQIHRYATFS 671
+S + + W +E + + E G L+ WD RT + H VK H +++ Y +F+
Sbjct: 217 ESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVN-YLSFN 269
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 555 TIITGHEAGDLIQWDLRTGKKIHSVKEHTHQI 650
T+ +GH G+L WD++TGK + V H+ +
Sbjct: 371 TVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAV 402
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 98 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHG 232
GH A+T + +R G+ + ++ +D+ NV+ + E GT G
Sbjct: 397 GHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASG 441
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 549 DETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQIHR--YATFS*RHNV 686
++++I + +L WD+ +G+ H++ HT ++ + FS RH V
Sbjct: 285 NKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVV 332
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 110 AITQIKYNREGDLLFSAAKDSKPNVWWSLNG-ERLGTFNGHGGVIWCLDATGSQLISSXV 286
A+T I ++ L++ + D N W N + G GH + CL A G+ + S
Sbjct: 302 AVTAIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLAVLCLVAAGNLMFS--- 358
Query: 287 VATVPAGYGIWR 322
+ G +WR
Sbjct: 359 -GSADLGIRVWR 369
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 101 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI--WCLDATGSQLI 274
H + +T + ++R+G L S + D + +G+ L F GH + + GS++I
Sbjct: 304 HSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRII 363
Query: 275 SSXVVATV 298
++ TV
Sbjct: 364 TASSDCTV 371
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 31.9 bits (69), Expect = 0.41
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 516 SKVXSMIWGSLDETIITGHEAGD---LIQWDLRTGKKIHSVKEHTHQIHRYATFS 671
S + + W +E I AGD L+ WDLRT + H VK H +I+ Y +F+
Sbjct: 219 SIIEDVAWHMKNENIFGS--AGDDCQLVIWDLRTNQMQHQVKVHEREIN-YLSFN 270
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG 214
+Q H+ +I IK++ +G L SA +D +W + ER G
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKG 399
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 495 FKMGNTDSKVXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQI 650
F + D+ V S+ D ++TG + WDLR GK + ++ H +
Sbjct: 296 FALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSV 347
Score = 31.1 bits (67), Expect = 0.73
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLETXKNIATLKSNSS 360
L+T G DS CR+WD+ T I L + +
Sbjct: 275 LLTGGRDSVCRVWDIRTKMQIFALSGHDN 303
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 250
L L GH + + + +FSA D + W + + +++GH ++CL
Sbjct: 212 LTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCL 266
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 31.5 bits (68), Expect = 0.55
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +2
Query: 98 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 253
GH+ I+ + ++ + + SA+ D +W G + T GH +C++
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVN 120
Score = 31.1 bits (67), Expect = 0.73
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGT 217
+L H +T + +NR+G L+ S++ D +W S G + T
Sbjct: 150 VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKT 192
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLETXKNIATLKSNSSVRTC-NFS 381
+++ D + +LWD+ET I TL +++ C NF+
Sbjct: 86 IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFN 122
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 31.5 bits (68), Expect = 0.55
Identities = 21/90 (23%), Positives = 36/90 (40%)
Frame = +2
Query: 101 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQLISS 280
H +T + N L S +KD ++ + G+ + + N H + C+ + S S+
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPS---SA 297
Query: 281 XVVATVPAGYGIWRXARILQHSNPTLL*EH 370
+ G LQHS P + EH
Sbjct: 298 TIPLAATGGMDKKLIIWDLQHSTPRFICEH 327
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 558 IITGHEAGDLIQWDLRTGKKIHSVKEHTH 644
I TG + LI W+ +T + IH VK H +
Sbjct: 212 ICTGSDDASLIVWNPKTCESIHIVKGHPY 240
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 83 PLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD-AT 259
P + H+ +T + + L + + ++W SL G + T++GH + + +T
Sbjct: 321 PRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVST 380
Query: 260 GSQLISSXVV 289
+ I S V
Sbjct: 381 NTDFIVSVSV 390
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 504 GNTDSKVXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVK 632
G+T KV S+ W I++ + G LI W+ T +K H++K
Sbjct: 63 GHT-GKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIK 104
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 235 CNMVP*RDWQSINLITXGGDSSCRLWDLET 324
C VP D +LIT GD +C LWD+ T
Sbjct: 162 CQYVPNED---AHLITSSGDQTCILWDVTT 188
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 504 GNTDSKVXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVK 632
G+T KV S+ W I++ + G LI W+ T +K H++K
Sbjct: 63 GHT-GKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIK 104
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 235 CNMVP*RDWQSINLITXGGDSSCRLWDLET 324
C VP D +LIT GD +C LWD+ T
Sbjct: 162 CQYVPNED---AHLITSSGDQTCILWDVTT 188
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 31.1 bits (67), Expect = 0.73
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 187
L GH + +T +K+ + DL+ +A+ D +W
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 31.1 bits (67), Expect = 0.73
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 187
L GH + +T +K+ + DL+ +A+ D +W
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 31.1 bits (67), Expect = 0.73
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 187
L GH + +T IK+ + DL+ +A+ D +W
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIW 291
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 30.7 bits (66), Expect = 0.96
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW 244
+L GH + ++ GD + S++ D+ +W + L + GH +W
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVW 464
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 187
L GH + + Y+ EG LL S + D +W
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 610
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER 208
+Q H+ AI +K++ +G L SA +D VW + ER
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDER 285
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER 208
+Q H+ AI +K++ +G L SA +D VW + ER
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDER 285
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 513 DSKVXSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVK 632
D +V S+ W I++ + G LI W+ T +K H++K
Sbjct: 3 DLQVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIK 42
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 235 CNMVP*RDWQSINLITXGGDSSCRLWDLET 324
C VP D +LIT GD +C LWD+ T
Sbjct: 100 CQYVPNED---AHLITSSGDQTCILWDVTT 126
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG 214
+Q H +I IK++ +G L SA +D ++W + E+ G
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKG 449
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 250
L+GH ++ + ++ + D++ S ++D VW + L TF W L
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWIL 296
>At5g05570.1 68418.m00605 transducin family protein / WD-40 repeat
family protein similar to unknown protein (pir||T04661);
contains Pfam PF00400: WD domain, G-beta repeat (4
copies, 2 weak)|8683726|gb|AV524198.1|AV524198
Length = 1124
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 519 KVXSMIWGSLDETIIT-GHEAGDLIQWDLRTGKK 617
++ S+ W S D +++ G+ GD++ WD G+K
Sbjct: 257 EISSLCWASTDGSVLAVGYVDGDILFWDFSDGQK 290
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWS-LNGE 205
L GHQ + Q++++ G L S D +W S LNGE
Sbjct: 276 LSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGE 314
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 501 MGNTDSKVXSMIWGSLDETIITGHEAGDLIQ--WDLRTGKKIHSVKEHTHQI 650
+G S + S+ + D T I D + WD+R+GK++H +K HT I
Sbjct: 976 VGRCSSAILSLEYD--DSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWI 1025
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +2
Query: 110 AITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH 229
AI ++Y+ +L +A +D+ N+W +G+++ GH
Sbjct: 982 AILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGH 1021
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLETXKNIATLKSNSS-VRTCNF 378
+ T DSS ++DL + +A LK +SS VR CN+
Sbjct: 416 IYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNW 451
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDATG 262
L L GH+ +I +I ++ +G + S + D +W + E +G GH +W +
Sbjct: 229 LRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISD 288
Query: 263 SQLISS 280
S ++++
Sbjct: 289 SLIVTA 294
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDATG 262
L L GH+ +I +I ++ +G + S + D +W + E +G GH +W +
Sbjct: 229 LRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISD 288
Query: 263 SQLISS 280
S ++++
Sbjct: 289 SLIVTA 294
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 83 PLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH--GGVIWCLDA 256
P + +GH+ ++ + N G +L S + VW G + GH + LD+
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDS 265
Query: 257 TGSQLIS 277
TG +S
Sbjct: 266 TGRFCLS 272
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 83 PLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH--GGVIWCLDA 256
P + +GH+ ++ + N G +L S + VW G + GH + LD+
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDS 265
Query: 257 TGSQLIS 277
TG +S
Sbjct: 266 TGRFCLS 272
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI 241
+GH+ IT + + L+ SA+ D VW +G + GH G +
Sbjct: 344 RGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAV 392
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWC 247
+L GH+R + ++ +G+ L +A+ D+ +W G+ + H C
Sbjct: 254 VLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVC 306
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 250
L+GH ++ + ++ + D++ S ++D VW + + TF W L
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWIL 296
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWW-SLNGERLGTFNGHGGVIWCLDATGS 265
+L + A+T + + +++ + D N W S G GH + CL G+
Sbjct: 319 VLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGIAGN 378
Query: 266 QLIS 277
L+S
Sbjct: 379 LLLS 382
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +2
Query: 86 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 187
+ L+GH+ A+T + ++ + + +A+KD VW
Sbjct: 283 MQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVW 316
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 558 IITGHEAGDLIQWDLRTGK-KIHSVKEHTHQI 650
++ G+E G ++ WD+R K + SVK H+ +
Sbjct: 234 VLAGYEDGSILLWDIRNAKIPLTSVKFHSEPV 265
Score = 28.3 bits (60), Expect = 5.1
Identities = 8/33 (24%), Positives = 20/33 (60%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 187
+L+GH+ ++ + ++ LLF+ + D + +W
Sbjct: 12 VLRGHRHSVMDVSFHPSKSLLFTGSADGELRIW 44
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +2
Query: 74 NMKPLM-LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH----GGV 238
N K +M L+GH + + ++ + +L S + D+ ++W G GH GV
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGV 166
Query: 239 IWCLDATGSQLISSXVVATV 298
W D GS + S TV
Sbjct: 167 TW--DPIGSFIASQSDDKTV 184
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 143 DLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQLISS 280
DL F +A W+L+GE L GH +++ +DA S LI S
Sbjct: 201 DLGFLSASHDGSIRLWALSGEVLLEMVGHTSLVYSVDAHSSGLIVS 246
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +2
Query: 149 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQLISSXVVATVPAGYGIWRXA 328
L S + D+ VW +NGE + T GH + + ++SS V T+ WR
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDIVSSSVDQTLKR----WRNG 141
Query: 329 RILQ 340
++++
Sbjct: 142 QLVE 145
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 143 DLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQLISS 280
DL F +A W+L+GE L GH +++ +DA S LI S
Sbjct: 201 DLGFLSASHDGSIRLWALSGEVLLEMVGHTSLVYSVDAHSSGLIVS 246
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +2
Query: 149 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQLISSXVVATVPAGYGIWRXA 328
L S + D+ VW +NGE + T GH + + ++SS V T+ WR
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDIVSSSVDQTLKR----WRNG 141
Query: 329 RILQ 340
++++
Sbjct: 142 QLVE 145
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
Frame = +2
Query: 62 KYFLNMKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGV 238
KY + L + A+T + ++ G ++ + D N W G GH
Sbjct: 281 KYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWEREKQLNYGGILKGHKLA 340
Query: 239 IWCLDATGSQLISSXVVATV 298
+ CL+ GS + S T+
Sbjct: 341 VLCLEVAGSLVFSGSADKTI 360
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 286 GGDSSCRLWDLETXKNIATLKSN-SSVRTCNFSYXAYQAA 402
G DS R+WDL T +NI + + V + +FS Y A
Sbjct: 149 GFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLA 188
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 256 DWQSINLITXGGDSSCRLWDLETXKNIATLKSNSSVRTCNFS 381
D +N + G+SS + WDL T K + +++ ++ VR +++
Sbjct: 177 DPHDVNAVAATGESSVQFWDLRTMKKVNSIE-HAHVRGVDYN 217
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 537 WGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTH 644
W D + + WDLRT KK++S+ EH H
Sbjct: 176 WDPHDVNAVAATGESSVQFWDLRTMKKVNSI-EHAH 210
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 268 INLITXGGDSSCRLWDL-ETXKNIATLKSN-SSVRTCNFS 381
+ T D +CR+WD + +++A LK N +VR+ F+
Sbjct: 332 VTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFT 371
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 268 INLITXGGDSSCRLWDL-ETXKNIATLKSN-SSVRTCNFS 381
+ T D +CR+WD + +++A LK N +VR+ F+
Sbjct: 326 VTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFT 365
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 555 TIITGHEAGDLIQWDLRTGKKI 620
TI+TG G L QWD+ G+++
Sbjct: 269 TIVTGSTDGSLKQWDIDNGRRV 290
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Frame = +2
Query: 89 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER----LGTF----NGHGGVIW 244
+L GH + + ++ D+LFS + D+ +W S + + + T NGH +W
Sbjct: 134 VLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVW 193
Query: 245 CL--DATGSQLIS 277
+ +A G ++++
Sbjct: 194 SISFNAAGDKMVT 206
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNG 202
L+GHQ+ +T + ++ ++L S+ DS+ V WS++G
Sbjct: 925 LKGHQKRVTGLAFSNVLNVLVSSGADSQLCV-WSMDG 960
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNG 202
L+GHQ+ +T + ++ ++L S+ DS+ V WS++G
Sbjct: 925 LKGHQKRVTGLAFSNVLNVLVSSGADSQLCV-WSMDG 960
>At3g02740.1 68416.m00266 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 488
Score = 28.7 bits (61), Expect = 3.9
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = +1
Query: 40 IYNKLLNKILSKHE--TSYAARAP-AC-HHTDQI*PRGXXXXXXXXXFKTKCLVVTERRT 207
+YN LLN+IL+ H T + + C H+TD++ K+ L V R
Sbjct: 328 VYNPLLNEILASHPELTLHTVQESFTCFHYTDKL---DRFPTVTFQFDKSVSLAVYPREY 384
Query: 208 SWHFQRPRWCNMVP*RDWQSINLITXGGDSSCRLWDL 318
+ + WC WQ+ L T GG S L D+
Sbjct: 385 LFQVREDTWC-----FGWQNGGLQTKGGASLTILGDM 416
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 256 DWQSINLITXGGDSSCRLWDLETXKNIATLKSNS 357
D QS ++ T GDS WD+E+ K T K +S
Sbjct: 168 DPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHS 201
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLET-XKNIATLKSN-SSVRTCNFS 381
L T D++CRLWD+ ++ A LK N ++R F+
Sbjct: 305 LATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFT 342
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLETXKN 333
L++ G DS RLWD+E+ +N
Sbjct: 327 LLSAGSDSRIRLWDIESGRN 346
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERL----GTFNGHGGVIWCLDAT 259
L+ H+ A+ + N +G +LFS + D VW + G GH I L
Sbjct: 276 LEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFNV 335
Query: 260 GSQLISSXVVATVPAGYGIWR 322
L+S TV IWR
Sbjct: 336 SDLLLSGSADRTV----RIWR 352
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 187
+Q HQ I +K++ + LL SA +D +VW
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVW 438
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 507 NTDSKVXSMIWG-SLDETIIT-GHEAGDLIQWDLRTGKKIHSVKEHTHQI 650
+T S+V ++ W +++E + T G+ +I W T KI ++ HT+++
Sbjct: 419 DTCSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRV 468
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 95 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI 241
+GH+ IT + + + SA+ D VW +G + GH G +
Sbjct: 284 RGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAV 332
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREG-DLLFSAAKDSKPNVWWSLNGER--LGTFNGHGG 235
+ GH A T + YN +LL + +KD +W N E + T N + G
Sbjct: 365 INGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAG 415
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +2
Query: 101 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI--WCLDATGSQLI 274
H AI I + + L +A+ D VW + G GH G + C T S L+
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 275 SS 280
S
Sbjct: 187 VS 188
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 558 IITGHEAGDLIQWDLRTGKK 617
+ +G +AGD + W+L TGKK
Sbjct: 261 LYSGVKAGDFVVWELGTGKK 280
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 274 LITXGGDSSCRLWDLET-XKNIATLKSN-SSVRTCNFS 381
L T D++CRLWD+ +++ LK N ++R F+
Sbjct: 334 LATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFT 371
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 101 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTF-NGHGGVI 241
H A++ + +R+G LL+S + D +W + + + L +F N H I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAI 211
>At5g18000.1 68418.m02111 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 307
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 610 VKKSTLL-KSIPTKFTDMQLSRDGTMF 687
+KKS LL IP KF DM + + TMF
Sbjct: 221 IKKSHLLFLGIPKKFVDMHMPTETTMF 247
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = +2
Query: 155 SAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDATGSQLISSXVVATVPAGYGIWRXARI 334
S ++DS+ +W G+ + GH G + C+ + + L A+ IW RI
Sbjct: 506 SGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNL-HMLASASDDGTIRIWGLDRI 564
Query: 335 LQHSNPTLL*EHATSAXV 388
Q + L + ++S V
Sbjct: 565 NQQNQKKKLVQGSSSNGV 582
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 110 AITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGT 217
A+ +K+N ++ S +D K ++ W NG+ LGT
Sbjct: 45 AVNSVKWNHTNLVVASTGEDKKISL-WRKNGQSLGT 79
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 98 GHQRAITQIKYNREGDLLFSAAKDSKPNVW 187
GH R++T + ++ + LL S ++D VW
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVW 147
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +2
Query: 92 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH 229
L GH + + + +G S + D + +W GE F GH
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGH 104
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 98 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW--CLDATGSQL 271
GH + + + ++ + + SA++D +W +L + G G W C+ + + L
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTL 162
Query: 272 ISSXVVATVPAGYGIW 319
+ + V A+ +W
Sbjct: 163 VPTIVSASWDKTVKVW 178
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 262 QSINLITXGGDSSCRLWDLETXKNIATLKSNSSVRTCNF 378
QS NL+ DS RL+D+E+ L S +++ C F
Sbjct: 24 QSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCF 62
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 262 QSINLITXGGDSSCRLWDLETXKNIATLKSNSSVRTCNF 378
QS NL+ DS RL+D+E+ L S +++ C F
Sbjct: 24 QSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCF 62
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 280 TXGGDSSCRLWDLET-XKNIATLKSN-SSVRTCNFS 381
T D +CR+WD+ K++A L+ N ++R+ ++
Sbjct: 334 TGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIRYT 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,473,050
Number of Sequences: 28952
Number of extensions: 316963
Number of successful extensions: 1225
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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