Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0448
(702 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 36 0.041
12_02_1226 - 27182423-27182768,27182855-27183765 33 0.29
12_01_0648 + 5496696-5497052 30 1.5
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 1.5
05_01_0167 - 1153778-1153927,1154006-1154797,1155602-1156408,115... 30 1.5
02_05_0040 + 25341418-25341810 30 1.5
03_06_0304 - 33001393-33001527,33001627-33001764,33001861-330019... 30 2.0
03_05_0466 - 24602715-24603964,24605762-24605944,24606381-246072... 30 2.0
02_01_0692 + 5179778-5181847 30 2.0
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 2.7
10_08_0898 + 21424379-21424792,21424974-21425723 29 2.7
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 29 2.7
10_06_0155 + 11306808-11306956,11307157-11307418,11307496-113076... 29 3.6
03_06_0305 - 33013315-33013449,33013554-33013691,33013806-330138... 29 3.6
02_05_0547 - 29894421-29894782,29894856-29895045 29 3.6
07_03_0476 - 18547223-18548187,18548743-18549958 29 4.7
07_01_0975 + 8223269-8224354 29 4.7
07_01_0466 - 3518315-3521428 29 4.7
05_05_0001 + 21410408-21411391 29 4.7
01_06_0922 - 33022709-33023545 29 4.7
11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780... 28 6.2
05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,364... 28 6.2
12_02_0735 - 22636835-22639502,22639755-22640734 28 8.3
11_07_0002 - 27171791-27172222 28 8.3
11_06_0743 + 26847652-26849424 28 8.3
09_02_0279 + 6702517-6702948 28 8.3
08_01_0490 + 4284192-4284740 28 8.3
08_01_0132 + 1055977-1056483,1058083-1058186,1058330-1058385,105... 28 8.3
07_03_1029 + 23379890-23380139,23380506-23381131 28 8.3
07_03_0276 + 16166528-16166796,16166824-16167291,16168048-161684... 28 8.3
02_05_0902 + 32620668-32621209,32621847-32622258,32622471-326226... 28 8.3
02_05_0686 - 30900748-30902167,30903442-30904742 28 8.3
01_03_0113 - 12647599-12648052,12648078-12648319 28 8.3
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 35.5 bits (78), Expect = 0.041
Identities = 26/58 (44%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 440 SRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEA-APHATVTLARWHQEDGTARRRLRT 610
S EE PA A MRRQS G TG G E+ A A V + +ED ARR RT
Sbjct: 13 SGDGEESAAPA-AGMRRQSTRGRSTGSGDGEESEALAAAVHAGKISREDAAARRMART 69
>12_02_1226 - 27182423-27182768,27182855-27183765
Length = 418
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +2
Query: 413 PLGAVPPP---SSRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEAAPHATVTLARWHQED 583
P G VP P SS + GV PAP++ SP V P AP + T A Q+D
Sbjct: 220 PAGVVPAPVQPSSPAAPAGV--VPAPVQPSSPATAVPKPPSNDPYAPATSNTPAAEEQKD 277
Query: 584 GTARRRLRTAMR 619
G + + +R
Sbjct: 278 GLNEKAISDIVR 289
>12_01_0648 + 5496696-5497052
Length = 118
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -1
Query: 543 GAASTPLGXPVTSPGGDCLLIGAGAGQTPSSDPRLDGGGTAPRG 412
G + P G GGD + G GAG LDG AP G
Sbjct: 28 GGGAGPPGGGARPSGGDAVTPGDGAGLPGGGAAALDGDAAAPGG 71
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +2
Query: 422 AVPPPSSRGSEEGVCPAPAPMRRQSPPGDVTGXP--KGVEAAPH 547
A PPP ++ P P P + PPG V P G PH
Sbjct: 749 APPPPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPPLHGASGRPH 792
>05_01_0167 -
1153778-1153927,1154006-1154797,1155602-1156408,
1156514-1156618,1156985-1157059,1157160-1157233,
1157388-1157450,1157549-1157647,1157704-1157811,
1157908-1157973,1158073-1158150,1158257-1158304,
1158381-1158440,1158527-1158610,1158902-1158949,
1159049-1159096,1161462-1161579
Length = 940
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 36 LRLDHNRPRANPNMVRRLTTHKFLT 110
L LDHN + PN VR L +HK+L+
Sbjct: 518 LDLDHNHELSPPNKVRFLRSHKYLS 542
>02_05_0040 + 25341418-25341810
Length = 130
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -1
Query: 558 VTVACGAASTPLGXPVTSPGGDCLLIGAGAGQTPSSDPRLDGGGTA 421
VTVA G A P G PGG ++ G + PS D GG A
Sbjct: 17 VTVAGGEAVLP-GGSTGVPGGGVEVLSGGGARVPSGDTAALAGGEA 61
>03_06_0304 -
33001393-33001527,33001627-33001764,33001861-33001938,
33002048-33002124,33003370-33003871
Length = 309
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 561 RVTVACGAASTPLGXPVTSPGGDCLLIGAGAGQTPSSDPRLDG 433
R+ ACGA LG P + P D +I A A + S+ +DG
Sbjct: 97 RLLDACGADVIELGVPFSDPYNDGPVIQASAARALSAGATMDG 139
>03_05_0466 -
24602715-24603964,24605762-24605944,24606381-24607286,
24609446-24609516,24609737-24609846,24610073-24610108,
24610211-24610278,24610655-24610760,24610850-24610997,
24611091-24611218,24611319-24611454,24611924-24612072
Length = 1096
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 253 AAPRKRCSTRACAPPCPRCSH 191
A P RC PPCP CSH
Sbjct: 17 ALPDARCLIHPSTPPCPVCSH 37
>02_01_0692 + 5179778-5181847
Length = 689
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 404 LFFPLGAVPPPSSRG--SEEGVCPAPAPMRRQSPPGDVTGXPKGV 532
L PL P P ++ PAPAP R Q PPG +G KGV
Sbjct: 245 LLVPLKNAPTPDMLAPPAQAPPPPAPAPPRAQPPPGG-SGSGKGV 288
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +2
Query: 413 PLGAVPPPSSRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEAAP 544
P GA PPP G G P P P R S P ++ G K V AP
Sbjct: 620 PPGAPPPPPPPGKPGG--PPPPPPRPGSLPRNLAGGDK-VHRAP 660
>10_08_0898 + 21424379-21424792,21424974-21425723
Length = 387
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = -1
Query: 570 QRARVTVACGAA---STPLGXPVTSPGGDCLLIGAGAGQTPSSDPRLDGGGTAPRGKK 406
+R+R T A AA P +SP C + PS R +G G RGKK
Sbjct: 203 KRSRATAAAAAAWHSLVPRPPSQSSPSSSCSSSDFPSSNKPSGTARPNGSGGGSRGKK 260
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -1
Query: 549 ACGAASTPLGXPVTSPGGDCLLIGAGAGQTPSSDPRLDGGGTAPRGKK 406
A AA+ P GG G G S DP+ DGGG A RG++
Sbjct: 22 AAAAAAASSSPPAAGGGG-----GGGLFDLMSPDPQEDGGGHARRGQQ 64
>10_06_0155 +
11306808-11306956,11307157-11307418,11307496-11307697,
11308118-11308353
Length = 282
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 470 APAPMRRQSPPGDVTGXPKGVEAAPHATVTLARWHQED 583
+P P SPP DV+ P V + ++ A WHQ D
Sbjct: 24 SPLPSPPGSPPRDVSTTPSFVLSTQYSGDYRADWHQRD 61
>03_06_0305 -
33013315-33013449,33013554-33013691,33013806-33013883,
33013986-33014062,33014439-33014982
Length = 323
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 561 RVTVACGAASTPLGXPVTSPGGDCLLIGAGAGQTPSSDPRLDG 433
RV ACGA LG P + P D +I A A + ++ +DG
Sbjct: 96 RVLDACGADVIELGVPFSDPYTDGPVIQASAARALAAGATMDG 138
>02_05_0547 - 29894421-29894782,29894856-29895045
Length = 183
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 419 GAVPPP-SSRGSEEGVCPAPAPMRRQSPPGDVT 514
G PPP SSR + PAPAP+ G T
Sbjct: 136 GTTPPPGSSRKGDRAAAPAPAPLASSGGRGVAT 168
>07_03_0476 - 18547223-18548187,18548743-18549958
Length = 726
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 45 DHNRPRANPNMVRRLTTHK 101
+HN P ANP+ V +L +HK
Sbjct: 367 EHNHPLANPDSVHKLRSHK 385
>07_01_0975 + 8223269-8224354
Length = 361
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = +2
Query: 413 PLGAVPP---PSSRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVE 535
P GA P PSS GS EG P+P+ PG P E
Sbjct: 317 PSGAAGPAEGPSSYGSTEGPSPSPSSSGSADAPGPGASAPDSEE 360
>07_01_0466 - 3518315-3521428
Length = 1037
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 413 PLGAVPPPSSRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEAAPHA 550
P+ PPP + + PAPA +PP D P+ E A A
Sbjct: 142 PVAPPPPPPEPPAAD---PAPAEAAPDAPPADADAAPEAPEKAEEA 184
>05_05_0001 + 21410408-21411391
Length = 327
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 117 NCRVGTGV*KLRRPEXADAEVPPLQWLQRGHGGAHARVLHRFRGAAR 257
N VG G K RR + A V + G GG A HRF G R
Sbjct: 80 NVPVGGGCRKNRRGKAVRAMVGETMTARGGGGGGAAAFSHRFHGPVR 126
>01_06_0922 - 33022709-33023545
Length = 278
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 431 PPSSRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEAAP 544
P + R E+ +PAP ++ PP V P+ V+ AP
Sbjct: 185 PAAKRTPEQRRAASPAPSLQRKPPVPVRPSPRRVQEAP 222
>11_06_0632 +
25674807-25675477,25676472-25677861,25677948-25678083,
25678185-25678282,25678470-25678535,25678699-25678827,
25679570-25679746,25680576-25680614
Length = 901
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 7 STVIYLFWYDCGWTIIALVQI 69
ST+ Y+ W +CGW ++L +
Sbjct: 826 STLQYILWPECGWQAVSLTDL 846
>05_01_0460 -
3644229-3644420,3644623-3644865,3644959-3645237,
3645328-3645525,3645614-3646249,3646352-3646606,
3646718-3646824,3646909-3650705,3650816-3651305,
3652043-3652433,3652621-3652713,3652818-3652941,
3653871-3654118
Length = 2350
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +2
Query: 416 LGAVPPPSSRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEAAPHATVTLAR-WHQ 577
+GA PPP G+ P PA PPG G P V AR WHQ
Sbjct: 1 MGAAPPPPGTGAPPP--PLPAAAAAAGPPGG--GKPLTPAELEAQLVEKARKWHQ 51
>12_02_0735 - 22636835-22639502,22639755-22640734
Length = 1215
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 561 RVTVACGAASTPLGXPVTSPGGDCLLIGAGAGQTPSSDPRLDGGGTA 421
R+++ GA T PV SPGGD ++ G+G T G TA
Sbjct: 4 RLSLPAGAPVTVAVSPVRSPGGDA-VVRRGSGLTSPVPRHSLGSSTA 49
>11_07_0002 - 27171791-27172222
Length = 143
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 564 ARVTVACGAASTPLGXPVTSPGGDCLLIGAGAGQTPSSDPR-LDGGGTAPRG 412
A T + A STP G SP G G G+G TP R GGG+A G
Sbjct: 58 AASTSSARAGSTPAGVR-GSPAGAGGSPGGGSGSTPVGGGRSFAGGGSADDG 108
>11_06_0743 + 26847652-26849424
Length = 590
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +2
Query: 431 PPSSRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEAAPHATVTLA 565
PP R + G C R ++PP T P A P A T A
Sbjct: 295 PPELRRARSGRCSPRCRRRARAPPSSSTSPPWPEPALPAAARTAA 339
>09_02_0279 + 6702517-6702948
Length = 143
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 564 ARVTVACGAASTPLGXPVTSPGGDCLLIGAGAGQTPSSDPR-LDGGGTAPRG 412
A T + A STP G SP G G G+G TP R GGG+A G
Sbjct: 58 AASTSSARAGSTPAGVR-GSPAGAGGSPGGGSGSTPVGGGRSFAGGGSADDG 108
>08_01_0490 + 4284192-4284740
Length = 182
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = +2
Query: 413 PLGAVPPPSSRGSEEGVCPA---PAPMRRQSPPGDVTGXPKGVEAAPHATVTLA 565
P G P RG GV A AP R SP G V AAP A A
Sbjct: 127 PPGGAGPREGRGGRGGVIHAVADSAPQRPGSPAEGAGGNGGAVHAAPAAAAAAA 180
>08_01_0132 +
1055977-1056483,1058083-1058186,1058330-1058385,
1058534-1058688,1058842-1058955,1059207-1059449
Length = 392
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +3
Query: 177 VPPLQWLQR--GHGGAHARVLHRFRGAARVLVAKIGP-DLSL 293
+PP L + GHG A A R RG L+ K GP DLSL
Sbjct: 16 IPPPSLLAQSCGHGAATAAAYPRVRGERGRLLPKQGPTDLSL 57
>07_03_1029 + 23379890-23380139,23380506-23381131
Length = 291
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 543 GAASTPLGXPVTSPGGDCLLIGAGAGQTPSSDPRLDG 433
G S+ L V S GG +G G G+ P + LDG
Sbjct: 93 GGGSSDLSMLVGSSGGGRRTVGDGGGEAPKLENFLDG 129
>07_03_0276 +
16166528-16166796,16166824-16167291,16168048-16168414,
16168565-16168587,16170094-16170385
Length = 472
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 42 LDHNRPRANPNMVRRLTTHKFLTNHN 119
LDHN P +PN +R L +H+ +++ +
Sbjct: 161 LDHNHPPLSPNSLRFLESHRNVSDED 186
>02_05_0902 +
32620668-32621209,32621847-32622258,32622471-32622675,
32622712-32622806,32622945-32623557,32623652-32623820,
32624392-32624749,32625226-32625336,32626207-32626561,
32627262-32627484,32627837-32628058,32628628-32628781
Length = 1152
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 422 AVPPPSSRGSEEGVCPAPAPMR 487
+VPPP S S+E P PAP +
Sbjct: 81 SVPPPLSASSDEEEAPRPAPAK 102
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 428 PPPSSRGSEEGVCPAPAPMRRQSPPGDVTGXPKG 529
PPP G ++G P P P S P G P G
Sbjct: 365 PPPPPPGGKKGGPPPPPPKGGASRPPAAPGVPTG 398
>01_03_0113 - 12647599-12648052,12648078-12648319
Length = 231
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 413 PLGAVPPPSSRGSEEGVCPAPAPMRRQSPPG 505
P A PP +S S CP P +RR G
Sbjct: 52 PSAASPPATSTASRSRTCPPPLALRRSQLRG 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,455,192
Number of Sequences: 37544
Number of extensions: 453374
Number of successful extensions: 2238
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2220
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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