Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0448
(702 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 35 0.003
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 35 0.003
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 34 0.005
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 32 0.015
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 31 0.035
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 29 0.11
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 29 0.11
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 25 1.7
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 24 4.0
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 24 5.3
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 24 5.3
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 24 5.3
AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan transpo... 23 9.3
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 23 9.3
AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan transpo... 23 9.3
AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative 5-oxoprol... 23 9.3
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 23 9.3
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 34.7 bits (76), Expect = 0.003
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 166 PTPKCHHCSGCNEDTAEHTLAYCTAFAEQRASSLQ 270
P+P+C C+G E A H L YC FAE R L+
Sbjct: 943 PSPECPACTGSVESVA-HVLFYCPRFAEVRRDLLE 976
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 34.7 bits (76), Expect = 0.003
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 139 FKNFVARRXPT--PKCHHCSGCNEDTAEHTLAYCTAFAEQRASSL 267
F++++ R T P C CSG E TAEH + C FAE R L
Sbjct: 926 FRDYLCRNGFTSSPDCQRCSGVPE-TAEHAMFECPRFAEVRQQLL 969
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 33.9 bits (74), Expect = 0.005
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 43 WTIIALVQIQIWYVA*Q-HTSF*LTITVGLAQVFKNFVARRX--PTPKCHHCSGCNEDTA 213
WT + I W+ +F L+ + F++ + R P+P C C+G E TA
Sbjct: 917 WTHRVIPDIAAWHFRRHGEVNFHLSQVLSGHGFFRDDLCRMGFTPSPDCIRCTGVPE-TA 975
Query: 214 EHTLAYCTAFAEQRASSL 267
EH + C FAE R L
Sbjct: 976 EHAMFECPRFAEIRQKLL 993
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 32.3 bits (70), Expect = 0.015
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 166 PTPKCHHCSGCNEDTAEHTLAYCTAFAEQRASSLQ 270
P+P C C+G E A H + C FA+ RA LQ
Sbjct: 948 PSPDCPRCAGSVESVA-HVMFECPRFADVRAEFLQ 981
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 31.1 bits (67), Expect = 0.035
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 431 PPSSRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEAAPHATVTLAR 568
PP G P PMR Q PPG V G G++ P + + R
Sbjct: 211 PPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQR 256
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 29.5 bits (63), Expect = 0.11
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 157 RRXPTPKCHHCSGCNEDTAEHTLAYCTAFAEQR 255
R +P C C E T EH L +C FAE+R
Sbjct: 901 RHASSPDCPACVSIVEST-EHVLFHCPRFAEER 932
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 29.5 bits (63), Expect = 0.11
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 169 TPKCHHCSGCNEDTAEHTLAYCTAFAEQR 255
+P C +C G E +AEH + C FAE R
Sbjct: 957 SPDCPNCPGVRE-SAEHAMFACLRFAEVR 984
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 25.4 bits (53), Expect = 1.7
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 443 RGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEAAPHATVTLARWHQE 580
R E G P P PMRR+ P P+ V A + L R +++
Sbjct: 1108 RAEEAGEAPPPIPMRRRGLPPS----PRTVRARHERRLYLQRLYRQ 1149
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 24.2 bits (50), Expect = 4.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 434 PSSRGSEEGVCPAPAPMRRQSPPGDVTG 517
PSSR + + P P P S G+ TG
Sbjct: 670 PSSRDRPKDLPPPPIPASGSSSTGNTTG 697
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.8 bits (49), Expect = 5.3
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 522 GXPVTSPGGDCLLIGAGAGQTPSSDPRLDGGGTAPR 415
G P TS G L+G+G G S DGGG R
Sbjct: 363 GSPSTSCGAPPALLGSGEG--GSGTHGTDGGGEFQR 396
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 23.8 bits (49), Expect = 5.3
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +2
Query: 503 GDVTGXPKGVEAAPHATVTLARWHQEDGTARRRL 604
GD+ V + + T+ W DGT R R+
Sbjct: 336 GDIRSAIGNVTGSASSIATIQLWQLSDGTQRARV 369
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 23.8 bits (49), Expect = 5.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 GXPKGVEAAPHATVTLARWHQEDGTARRRLRTAMR 619
G + +E A T + W + DGT R R+R R
Sbjct: 226 GLQRALERTAVAATT-SLWERRDGTQRARVRLPRR 259
>AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.0 bits (47), Expect = 9.3
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +1
Query: 58 LVQIQIWYVA*QHTSF*LTITVGLAQVFKNF 150
+++ ++WY A F LTI G ++ ++
Sbjct: 315 ILEAKVWYAAVTQVFFSLTICFGNVMMYSSY 345
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
exchanger 3 protein.
Length = 1221
Score = 23.0 bits (47), Expect = 9.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 486 LIGAGAGQTPSSDPRLDGGGTAP 418
LI A + TP S R GGG P
Sbjct: 1130 LIKASSTNTPKSAGRRSGGGGGP 1152
>AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.0 bits (47), Expect = 9.3
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +1
Query: 58 LVQIQIWYVA*QHTSF*LTITVGLAQVFKNF 150
+++ ++WY A F LTI G ++ ++
Sbjct: 315 ILEAKVWYAAVTQVFFSLTICFGNVMMYSSY 345
>AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 756
Score = 23.0 bits (47), Expect = 9.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 513 VTSPGGDCLLIGAGAGQTPSSDPRLD 436
VT G + IG GA P D RLD
Sbjct: 694 VTRRGDLTIEIGTGAAARPRVDERLD 719
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 1344
Score = 23.0 bits (47), Expect = 9.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 204 GHGGAHARVLHRFRGAARVLVAKIGPDLS 290
G GG HA + R G ARV++ K LS
Sbjct: 505 GAGGQHACSIARQLGMARVVMHKYAGILS 533
Score = 23.0 bits (47), Expect = 9.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 513 VTSPGGDCLLIGAGAGQTPSSDPRLD 436
VT G + IG GA P D RLD
Sbjct: 738 VTRRGDLTIEIGTGAAARPRVDERLD 763
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,505
Number of Sequences: 2352
Number of extensions: 12862
Number of successful extensions: 99
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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