Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0448
         (702 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ278684-2|CAB99192.1|  989|Drosophila melanogaster endonuclease...    36   0.070
BT029132-1|ABJ17065.1| 1335|Drosophila melanogaster IP16240p pro...    33   0.50 
AE014297-3565|AAF56311.1| 1729|Drosophila melanogaster CG6631-PA...    33   0.50 
BT025836-1|ABF85736.1|  335|Drosophila melanogaster IP10849p pro...    30   3.5  
AE014298-1116|AAF46317.2|  328|Drosophila melanogaster CG2256-PB...    30   3.5  
AY094967-1|AAM11320.1| 1711|Drosophila melanogaster SD07675p pro...    29   4.6  
AE013599-3504|AAF46928.2| 1711|Drosophila melanogaster CG3820-PA...    29   4.6  
AE014298-2086|AAF48410.1| 1174|Drosophila melanogaster CG10952-P...    29   6.1  
AE014298-2085|ABI30980.1| 1270|Drosophila melanogaster CG10952-P...    29   6.1  
K02620-1|AAA28967.1|  510|Drosophila melanogaster protein ( D.me...    29   8.1  
BT029125-1|ABJ17058.1|  501|Drosophila melanogaster IP16008p pro...    29   8.1  
BT011165-1|AAR82833.1| 1796|Drosophila melanogaster AT07527p pro...    29   8.1  
AE014297-1996|AAN13647.2|  501|Drosophila melanogaster CG4898-PF...    29   8.1  

>AJ278684-2|CAB99192.1|  989|Drosophila melanogaster
            endonuclease/reverse transcriptase protein.
          Length = 989

 Score = 35.5 bits (78), Expect = 0.070
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
 Frame = +1

Query: 43   WTIIALVQIQIWYVA*QHTSF*LTITVGLAQ--VFKNFVAR--RXPTPKCHHCSGCNEDT 210
            WT   + Q+  W    +H +    +T  L     F+ ++ R     T +C +C+   E T
Sbjct: 865  WTYKLIPQLTEWADC-EHKTVDYHMTQFLTDHGCFRGYLCRFRHVDTAQCLYCTDAVE-T 922

Query: 211  AEHTLAYCTAFAEQRA 258
            AEH L +C+ FAE+RA
Sbjct: 923  AEHILLHCSRFAEERA 938


>BT029132-1|ABJ17065.1| 1335|Drosophila melanogaster IP16240p
           protein.
          Length = 1335

 Score = 32.7 bits (71), Expect = 0.50
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +2

Query: 428 PPPSSRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEAAPHATVTLAR 568
           PP S R   E   P PAP  R+SP     G PK    AP    ++ R
Sbjct: 323 PPRSPRKCVEREEPVPAPAPRKSPTKTAKGSPKKTVTAPRNQPSVKR 369


>AE014297-3565|AAF56311.1| 1729|Drosophila melanogaster CG6631-PA,
           isoform A protein.
          Length = 1729

 Score = 32.7 bits (71), Expect = 0.50
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +2

Query: 428 PPPSSRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEAAPHATVTLAR 568
           PP S R   E   P PAP  R+SP     G PK    AP    ++ R
Sbjct: 323 PPRSPRKCVEREEPVPAPAPRKSPTKTAKGSPKKTVTAPRNQPSVKR 369


>BT025836-1|ABF85736.1|  335|Drosophila melanogaster IP10849p
           protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 480 GAGAGQTPSSDPRLDGGGTAPRG 412
           GAG G++P+  P  DGG TA  G
Sbjct: 3   GAGKGRSPTPTPNRDGGATAGAG 25


>AE014298-1116|AAF46317.2|  328|Drosophila melanogaster CG2256-PB
           protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 480 GAGAGQTPSSDPRLDGGGTAPRG 412
           GAG G++P+  P  DGG TA  G
Sbjct: 9   GAGKGRSPTPTPNRDGGATAGAG 31


>AY094967-1|AAM11320.1| 1711|Drosophila melanogaster SD07675p protein.
          Length = 1711

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -1

Query: 534  STPLGXPVTSP--GGDCLLIGAGAGQTPSSDPRLDGGGTAPRG 412
            S P+G P  SP  GG   + G+ A   P+S   + GGG++  G
Sbjct: 1528 SNPVGSPQASPFGGGGNSIFGSPATAPPASGGSIFGGGSSSGG 1570


>AE013599-3504|AAF46928.2| 1711|Drosophila melanogaster CG3820-PA
            protein.
          Length = 1711

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -1

Query: 534  STPLGXPVTSP--GGDCLLIGAGAGQTPSSDPRLDGGGTAPRG 412
            S P+G P  SP  GG   + G+ A   P+S   + GGG++  G
Sbjct: 1528 SNPVGSPQASPFGGGGNSIFGSPATAPPASGGSIFGGGSSSGG 1570


>AE014298-2086|AAF48410.1| 1174|Drosophila melanogaster CG10952-PA,
            isoform A protein.
          Length = 1174

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 543  GAASTPLGXPVTSPGGDCLLIGAGAGQTPSSDPRLDGGGTAPRGK 409
            G+ +TP   P T+ GG     G+G   + ++     G GTA RGK
Sbjct: 1130 GSGATPTTPPPTTAGGS----GSGTPTSTTATTTPTGSGTATRGK 1170


>AE014298-2085|ABI30980.1| 1270|Drosophila melanogaster CG10952-PB,
            isoform B protein.
          Length = 1270

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 543  GAASTPLGXPVTSPGGDCLLIGAGAGQTPSSDPRLDGGGTAPRGK 409
            G+ +TP   P T+ GG     G+G   + ++     G GTA RGK
Sbjct: 1226 GSGATPTTPPPTTAGGS----GSGTPTSTTATTTPTGSGTATRGK 1266


>K02620-1|AAA28967.1|  510|Drosophila melanogaster protein (
           D.melanogaster tropomyosingene isoform 33 (9B0, exon
           10B. ).
          Length = 510

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +2

Query: 422 AVPPPSSRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEAAPHA 550
           A PP  +   +    P P P   ++ P    G     EAAP A
Sbjct: 463 AAPPAPAAEGDAAAAPPPPPAEGEAAPAPAEGEAPPAEAAPAA 505


>BT029125-1|ABJ17058.1|  501|Drosophila melanogaster IP16008p
           protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +2

Query: 422 AVPPPSSRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEAAPHA 550
           A PP  +   +    P P P   ++ P    G     EAAP A
Sbjct: 454 AAPPAPAAEGDAAAAPPPPPAEGEAAPAPAEGEAPPAEAAPAA 496


>BT011165-1|AAR82833.1| 1796|Drosophila melanogaster AT07527p
           protein.
          Length = 1796

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 419 GAVPPPSSRGSEEGVCPAPAPMRRQSPPG 505
           G  PPP    S++    +P+P RR++ PG
Sbjct: 341 GHSPPPPLHRSDDSSSSSPSPTRRRNKPG 369


>AE014297-1996|AAN13647.2|  501|Drosophila melanogaster CG4898-PF,
           isoform F protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +2

Query: 422 AVPPPSSRGSEEGVCPAPAPMRRQSPPGDVTGXPKGVEAAPHA 550
           A PP  +   +    P P P   ++ P    G     EAAP A
Sbjct: 454 AAPPAPAAEGDAAAAPPPPPAEGEAAPAPAEGEAPPAEAAPAA 496


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,782,863
Number of Sequences: 53049
Number of extensions: 691674
Number of successful extensions: 3196
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3176
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)