Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0447
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.0  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.5  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -3

Query: 515 FVNFNNLHSYFKWSIFITALRH 450
           F+N +++  YFKW  F++  R+
Sbjct: 575 FLNVSSIPIYFKWLSFLSWFRY 596


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -3

Query: 515 FVNFNNLHSYFKWSIFITALRH 450
           F+N +++  YFKW  F++  R+
Sbjct: 575 FLNVSSIPIYFKWLSFLSWFRY 596


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
 Frame = -1

Query: 421 TVIFKRKGTIARSPVDTLTTPTILRHCQSQK--STQTKH*SFISKPC*NSALSRS 263
           T+I    G       + LT  TIL  C+S    S  +K   F    C NS L ++
Sbjct: 16  TIIISCPGGFVMEDANNLTQSTILTTCESNTDFSFGSKTIDFRKIQCSNSPLRKA 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 607  IHKK*IVDPPQHS 569
            +H   +V PPQHS
Sbjct: 1799 VHSSTVVPPPQHS 1811


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 589 LFIFCVFYYLAT 624
           +F+FC F YL T
Sbjct: 144 VFVFCYFIYLFT 155


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 591 IYFLCILLFGNVLVFVCTKIV*VTHQTWCT 680
           ++ LC   F   L+F C  I+   H   CT
Sbjct: 71  LFLLCSGYFTVHLLFYCPFIIFTVHFLLCT 100


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 512 VNFNNLHSYFKWS 474
           VNFN+  SYF+ S
Sbjct: 26  VNFNHRESYFRLS 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,996
Number of Sequences: 336
Number of extensions: 3918
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)