Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0447
(691 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical p... 28 5.5
Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical p... 28 5.5
Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical pr... 28 5.5
U29612-4|AAA68803.1| 326|Caenorhabditis elegans Hypothetical pr... 28 5.5
>Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 539 ILM*VPTLFVNFNNLHSYFKWSIFITALRHNVLHTF*IGDSHLQTKGHHCK 387
I + VP + NF+NL+S+ + + R VL + + L K HH K
Sbjct: 457 IALPVPVIVSNFSNLYSHSQARAKLPKKRRRVLQAHEVKPALLGVKQHHGK 507
>Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 539 ILM*VPTLFVNFNNLHSYFKWSIFITALRHNVLHTF*IGDSHLQTKGHHCK 387
I + VP + NF+NL+S+ + + R VL + + L K HH K
Sbjct: 503 IALPVPVIVSNFSNLYSHSQARAKLPKKRRRVLQAHEVKPALLGVKQHHGK 553
>Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 539 ILM*VPTLFVNFNNLHSYFKWSIFITALRHNVLHTF*IGDSHLQTKGHHCK 387
I + VP + NF+NL+S+ + + R VL + + L K HH K
Sbjct: 457 IALPVPVIVSNFSNLYSHSQARAKLPKKRRRVLQAHEVKPALLGVKQHHGK 507
>Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 539 ILM*VPTLFVNFNNLHSYFKWSIFITALRHNVLHTF*IGDSHLQTKGHHCK 387
I + VP + NF+NL+S+ + + R VL + + L K HH K
Sbjct: 503 IALPVPVIVSNFSNLYSHSQARAKLPKKRRRVLQAHEVKPALLGVKQHHGK 553
>Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical
protein F14F11.1g protein.
Length = 513
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 539 ILM*VPTLFVNFNNLHSYFKWSIFITALRHNVLHTF*IGDSHLQTKGHHCK 387
I + VP + NF+NL+S+ + + R VL + + L K HH K
Sbjct: 427 IALPVPVIVSNFSNLYSHSQARAKLPKKRRRVLQAHEVKPALLGVKQHHGK 477
>Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical
protein F14F11.1f protein.
Length = 510
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 539 ILM*VPTLFVNFNNLHSYFKWSIFITALRHNVLHTF*IGDSHLQTKGHHCK 387
I + VP + NF+NL+S+ + + R VL + + L K HH K
Sbjct: 424 IALPVPVIVSNFSNLYSHSQARAKLPKKRRRVLQAHEVKPALLGVKQHHGK 474
>Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical
protein F14F11.1e protein.
Length = 516
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 539 ILM*VPTLFVNFNNLHSYFKWSIFITALRHNVLHTF*IGDSHLQTKGHHCK 387
I + VP + NF+NL+S+ + + R VL + + L K HH K
Sbjct: 430 IALPVPVIVSNFSNLYSHSQARAKLPKKRRRVLQAHEVKPALLGVKQHHGK 480
>Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical
protein F14F11.1d protein.
Length = 503
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 539 ILM*VPTLFVNFNNLHSYFKWSIFITALRHNVLHTF*IGDSHLQTKGHHCK 387
I + VP + NF+NL+S+ + + R VL + + L K HH K
Sbjct: 417 IALPVPVIVSNFSNLYSHSQARAKLPKKRRRVLQAHEVKPALLGVKQHHGK 467
>Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical
protein F14F11.1a protein.
Length = 493
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 539 ILM*VPTLFVNFNNLHSYFKWSIFITALRHNVLHTF*IGDSHLQTKGHHCK 387
I + VP + NF+NL+S+ + + R VL + + L K HH K
Sbjct: 407 IALPVPVIVSNFSNLYSHSQARAKLPKKRRRVLQAHEVKPALLGVKQHHGK 457
>U29612-4|AAA68803.1| 326|Caenorhabditis elegans Hypothetical
protein C09B8.5 protein.
Length = 326
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -2
Query: 666 DG*LTLF*YTQRRER-CQIVKYTKNK*LIPRNI--PCLLIFLALKDSHVSTDLVRKFQ 502
DG + F YT+RR+ C++V + +P + C+L +L KD H+ + K +
Sbjct: 64 DGMIIRFDYTRRRKDFCRVVTSRMSTLDLPDKVISRCILFYLNRKDIHIKQLTINKMK 121
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,280,060
Number of Sequences: 27780
Number of extensions: 339957
Number of successful extensions: 789
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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