Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0446
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007587-1|AAH07587.1|  839|Homo sapiens LPHN1 protein protein.        30   7.0  
AF307079-1|AAG27461.1| 1469|Homo sapiens lectomedin-2 protein.         30   7.0  
AB065919-1|BAC06134.1| 1474|Homo sapiens seven transmembrane hel...    30   7.0  
AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein.     30   7.0  

>BC007587-1|AAH07587.1|  839|Homo sapiens LPHN1 protein protein.
          Length = 839

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
 Frame = -2

Query: 673 LTLSFLTIFMEKKKKIVWYLKTSIRYH---LFYVFH*LHIQSQ---SSGKCNAHSNCCIR 512
           LT +F  +F+ K+  ++ YL T+         +VFH   +Q +      KC  HS CCIR
Sbjct: 427 LTWAFGLLFINKESVVMAYLFTTFNAFQGVFIFVFH-CALQKKVHKEYSKCLRHSYCCIR 485

Query: 511 N 509
           +
Sbjct: 486 S 486


>AF307079-1|AAG27461.1| 1469|Homo sapiens lectomedin-2 protein.
          Length = 1469

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
 Frame = -2

Query: 673  LTLSFLTIFMEKKKKIVWYLKTSIRYH---LFYVFH*LHIQSQ---SSGKCNAHSNCCIR 512
            LT +F  +F+ K+  ++ YL T+         +VFH   +Q +      KC  HS CCIR
Sbjct: 1057 LTWAFGLLFINKESVVMAYLFTTFNAFQGVFIFVFH-CALQKKVHKEYSKCLRHSYCCIR 1115

Query: 511  N 509
            +
Sbjct: 1116 S 1116


>AB065919-1|BAC06134.1| 1474|Homo sapiens seven transmembrane helix
            receptor protein.
          Length = 1474

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
 Frame = -2

Query: 673  LTLSFLTIFMEKKKKIVWYLKTSIRYH---LFYVFH*LHIQSQ---SSGKCNAHSNCCIR 512
            LT +F  +F+ K+  ++ YL T+         +VFH   +Q +      KC  HS CCIR
Sbjct: 1062 LTWAFGLLFINKESVVMAYLFTTFNAFQGVFIFVFH-CALQKKVHKEYSKCLRHSYCCIR 1120

Query: 511  N 509
            +
Sbjct: 1121 S 1121


>AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein.
          Length = 1566

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
 Frame = -2

Query: 673  LTLSFLTIFMEKKKKIVWYLKTSIRYH---LFYVFH*LHIQSQ---SSGKCNAHSNCCIR 512
            LT +F  +F+ K+  ++ YL T+         +VFH   +Q +      KC  HS CCIR
Sbjct: 1154 LTWAFGLLFINKESVVMAYLFTTFNAFQGVFIFVFH-CALQKKVHKEYSKCLRHSYCCIR 1212

Query: 511  N 509
            +
Sbjct: 1213 S 1213


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,004,138
Number of Sequences: 237096
Number of extensions: 1719465
Number of successful extensions: 2816
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2816
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)