Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0445
         (704 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DAE3AC Cluster: hypothetical protein Rgryl_01000...    33   5.2  
UniRef50_A7TM76 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_UPI0000DAE3AC Cluster: hypothetical protein
           Rgryl_01000169; n=1; Rickettsiella grylli|Rep:
           hypothetical protein Rgryl_01000169 - Rickettsiella
           grylli
          Length = 386

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -2

Query: 226 ELFDKRRLWN*FVKQMMKIDKYLYKAFKNIIQLY-YLACYIKHFNNNY 86
           E++ +++ W   +KQ  KI K+  K FKNI   Y  LA  + +  NN+
Sbjct: 151 EIYQQQKRWEIAIKQAKKISKWDSKIFKNIAHYYCELALNLLNAENNH 198


>UniRef50_A7TM76 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 399

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
 Frame = -2

Query: 223 LFDKRRLWN*FVKQMMKID-KYLYKAFKNIIQLYYLACYIKH----FNNNYNYIN 74
           +FD   LW  FVKQ   +    LY + ++IIQ YYL+   K+    FNN+   I+
Sbjct: 53  IFDDDELWENFVKQEFPLRVSDLYTSRRDIIQTYYLSFVKKNDPELFNNDRELID 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,415,465
Number of Sequences: 1657284
Number of extensions: 9972301
Number of successful extensions: 17981
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17973
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)