Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0444
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.4  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   4.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 694 SFIQLIIPTFXVYFYYSIIIVSFLNLLRLSF 602
           SF +  + +  +  YY  +++S +N+L  SF
Sbjct: 166 SFFKTFLNSCLMDVYYEFLLISLINILIRSF 196



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 480 FNVFYIA*KYGNISNQQKRKMCFIYLT 400
           FN+F I   Y    N    K+C +Y T
Sbjct: 415 FNIFLITPFYNFNENTIHSKLCKLYAT 441


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +3

Query: 483 YRDLCSLQYRSWNNEICKVGCIHCKNQFNKNFAPI 587
           Y+ LC +    W  ++C V  + CK+   +   P+
Sbjct: 121 YQCLCGV---GWTGKVCDVEMVSCKDAALRKVVPL 152


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 371 LNIPMESGIGVK*IKHIFLF 430
           L +P    IG+K ++H+F F
Sbjct: 366 LRLPALRSIGLKCLEHLFFF 385


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 447 NISNQQKRKMCFIYLTPMPDSIGMF 373
           N  N+Q  K+  +Y +  PDS+  F
Sbjct: 349 NTYNEQGNKLADLYKSLGPDSVYSF 373


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 447 NISNQQKRKMCFIYLTPMPDSIGMF 373
           N  N+Q  K+  +Y +  PDS+  F
Sbjct: 241 NTYNEQGNKLADLYKSLGPDSVYSF 265


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 268 DLQVELKT*KGHIL*YVYHFLH 203
           D+++ L   K +   ++YHFLH
Sbjct: 87  DVELVLTDTKQNTKSFIYHFLH 108


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/29 (27%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -3

Query: 486 YIFNVFYIA*KYGNISNQ-QKRKMCFIYL 403
           Y+F++FY++ +  ++ N+  K K+  + L
Sbjct: 202 YVFDLFYLSKRASDLCNEANKTKILLVGL 230


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 268 DLQVELKT*KGHIL*YVYHFLH 203
           D+++ L   K +   ++YHFLH
Sbjct: 87  DVELVLTDTKQNTKSFIYHFLH 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,874
Number of Sequences: 336
Number of extensions: 3444
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)