Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0442
         (298 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   0.92 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   1.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   2.1  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    20   6.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    20   6.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    20   6.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    19   8.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    19   8.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
          adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 0.92
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 58 GHAVGDIPGVR 90
          G AVGD+PG+R
Sbjct: 62 GTAVGDVPGLR 72


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +1

Query: 31  ILVAGFGRKGHAVG 72
           ILV GFGR  H VG
Sbjct: 246 ILVNGFGRFKHFVG 259


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -1

Query: 172 CTPMILVAPFSLCRERGET 116
           C P + V P   C E G T
Sbjct: 163 CDPAVCVLPDCFCSEDGTT 181


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 110 PTCLSSLSTKRKRSDQDHRCT 172
           PT  +S STK    D D  C+
Sbjct: 200 PTASNSKSTKVLFKDVDRNCS 220


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 110 PTCLSSLSTKRKRSDQDHRCT 172
           PT  +S STK    D D  C+
Sbjct: 200 PTASNSKSTKVLFKDVDRNCS 220


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 110 PTCLSSLSTKRKRSDQDHRCT 172
           PT  +S STK    D D  C+
Sbjct: 200 PTASNSKSTKVLFKDVDRNCS 220


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 19.4 bits (38), Expect = 8.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 90  TNSGNVTDGVTFTTESRH*YSSFSSMW 10
           TN+  +T   +  TES   Y+SF   +
Sbjct: 458 TNNAIMTPPASVQTESSDNYNSFHQFY 484


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 19.4 bits (38), Expect = 8.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 90  TNSGNVTDGVTFTTESRH*YSSFSSMW 10
           TN+  +T   +  TES   Y+SF   +
Sbjct: 406 TNNAIMTPPASVQTESSDNYNSFHQFY 432


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,258
Number of Sequences: 336
Number of extensions: 1064
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5322850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)