Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0440
         (646 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YRF0 Cluster: Putative uncharacterized protein; n=1; ...    39   0.090

>UniRef50_Q4YRF0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 205

 Score = 39.1 bits (87), Expect = 0.090
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
 Frame = -1

Query: 493 IVNTKQMILLYVPVFF----CENSHHNCLSRFYFAVVER--QNVSVVTYRTYLRMKQYVL 332
           I+N KQ+  + +P+F     C N  H+    +Y+   E+  +N+S+     Y++   ++L
Sbjct: 39  IINNKQIENIILPIFIKKGECINYDHSEFFFYYYKNSEQIFKNISIDCTNKYMQPSFHML 98

Query: 331 YNY--IIRYHNIFDNNGTPLLIWIQQIFN 251
                 I YHN F+NN   LL + +Q F+
Sbjct: 99  REKRDFINYHNFFNNNKNYLLPYWEQNFH 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,165,685
Number of Sequences: 1657284
Number of extensions: 10764112
Number of successful extensions: 22128
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 21090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22124
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)