Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0440
         (646 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434...    33   0.19 
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766...    30   1.4  
09_04_0319 + 16649954-16649971,16650086-16650139,16651527-166516...    27   9.7  

>11_06_0151 - 20643032-20643085,20643202-20643307,20643415-20643495,
            20643588-20643715,20643829-20643903,20644853-20645374,
            20646622-20646687,20647990-20648076,20648173-20648247,
            20648705-20648821,20648932-20649015,20649152-20649217,
            20649352-20649417,20650079-20650150,20650231-20650332,
            20650428-20650605,20650700-20650755,20653159-20653269,
            20653354-20653422,20653558-20653741,20653826-20653914,
            20654070-20654147,20654509-20654631,20654755-20654874,
            20654975-20655055,20655285-20655431,20655533-20655611,
            20657114-20657223,20659138-20659236,20659467-20659582,
            20659673-20659781,20659839-20660069,20660152-20660417,
            20661349-20661506,20661601-20661751,20661897-20661966,
            20662203-20662232
          Length = 1451

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 237  NSIFSILPLYYSIENIKRQFYSLNAKGLPSE 145
            + I+ I PL+  IENI  Q+++L A+ +P E
Sbjct: 961  HKIYKIFPLHEKIENINDQYWTLRAEEIPEE 991


>12_02_0381 + 18376045-18376114,18376270-18376420,18376524-18376681,
            18378680-18378945,18379025-18379243,18379309-18379417,
            18379488-18379603,18379935-18380033,18381447-18381556,
            18382928-18383006,18383127-18383273,18383363-18383443,
            18383529-18383648,18383902-18384024,18384276-18384353,
            18384459-18384547,18384653-18384761,18385018-18385086,
            18385200-18385310,18385657-18385712,18385808-18385985,
            18386065-18386166,18386243-18386314,18386489-18386554,
            18386674-18386739,18386853-18386936,18387080-18387196,
            18388077-18388163,18389321-18389341
          Length = 1050

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 237  NSIFSILPLYYSIENIKRQFYSLNAKGLPSE 145
            + I+ I P +  IENI  Q+++L A+ +P E
Sbjct: 922  HKIYKIFPPHEKIENINDQYWTLRAEEIPEE 952


>09_04_0319 +
           16649954-16649971,16650086-16650139,16651527-16651603,
           16651928-16651976,16654534-16654782
          Length = 148

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -1

Query: 403 AVVERQNVSVVTYRTYLRMKQYVLYNYIIRYHNIFDNNGTPLLIWIQQIFNL 248
           A+VE+ NV  V   TY++        YI++  N FD+N    ++ + ++F L
Sbjct: 45  ALVEKSNVHFVDTETYVQ--------YIVKLDNKFDSNLMKKILSVIEVFEL 88


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,237,752
Number of Sequences: 37544
Number of extensions: 253060
Number of successful extensions: 392
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)