Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0438
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146787-1|AAI46788.1| 1364|Homo sapiens pleckstrin homology dom...    40   0.011
AB033026-1|BAA86514.1| 1403|Homo sapiens KIAA1200 protein protein.     40   0.011
AL833400-1|CAD38637.1|  930|Homo sapiens hypothetical protein pr...    34   0.42 
AB095948-1|BAC23124.1| 1449|Homo sapiens KIAA2028 protein protein.     34   0.42 

>BC146787-1|AAI46788.1| 1364|Homo sapiens pleckstrin homology domain
            containing, family H (with MyTH4 domain) member 1
            protein.
          Length = 1364

 Score = 39.5 bits (88), Expect = 0.011
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = -2

Query: 351  PPTYSFVQGWQLLALAVSLFVPRNNRLLWYLK 256
            P  YS +Q WQLLAL   LF+P+++  LWY+K
Sbjct: 910  PQKYSLMQCWQLLALCAPLFLPQHH-FLWYVK 940


>AB033026-1|BAA86514.1| 1403|Homo sapiens KIAA1200 protein protein.
          Length = 1403

 Score = 39.5 bits (88), Expect = 0.011
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = -2

Query: 351  PPTYSFVQGWQLLALAVSLFVPRNNRLLWYLK 256
            P  YS +Q WQLLAL   LF+P+++  LWY+K
Sbjct: 949  PQKYSLMQCWQLLALCAPLFLPQHH-FLWYVK 979


>AL833400-1|CAD38637.1|  930|Homo sapiens hypothetical protein
           protein.
          Length = 930

 Score = 34.3 bits (75), Expect = 0.42
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -2

Query: 333 VQGWQLLALAVSLFVPRNNRLLWYLK 256
           +QGWQLLAL V LF+P ++  LW L+
Sbjct: 477 LQGWQLLALCVGLFLP-HHPFLWLLR 501


>AB095948-1|BAC23124.1| 1449|Homo sapiens KIAA2028 protein protein.
          Length = 1449

 Score = 34.3 bits (75), Expect = 0.42
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -2

Query: 333  VQGWQLLALAVSLFVPRNNRLLWYLK 256
            +QGWQLLAL V LF+P ++  LW L+
Sbjct: 996  LQGWQLLALCVGLFLP-HHPFLWLLR 1020


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,985,237
Number of Sequences: 237096
Number of extensions: 1758577
Number of successful extensions: 6304
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6304
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)