Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0438
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA...    82   8e-16
AL031583-9|CAA20901.1| 1014|Drosophila melanogaster EG:34F3.2 pr...    81   1e-15

>AE014298-113|AAF45555.2| 1561|Drosophila melanogaster CG12467-PA
            protein.
          Length = 1561

 Score = 81.8 bits (193), Expect = 8e-16
 Identities = 37/48 (77%), Positives = 42/48 (87%), Gaps = 2/48 (4%)
 Frame = -2

Query: 393  NFQAPLLS--VDCKSNPPTYSFVQGWQLLALAVSLFVPRNNRLLWYLK 256
            + QAP  +  +DCKSNPP YSFVQGWQLLALAVSLFVPR++RLLWYLK
Sbjct: 1026 SIQAPSATPIIDCKSNPPVYSFVQGWQLLALAVSLFVPRSSRLLWYLK 1073


>AL031583-9|CAA20901.1| 1014|Drosophila melanogaster EG:34F3.2
           protein.
          Length = 1014

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 34/38 (89%), Positives = 37/38 (97%)
 Frame = -2

Query: 369 VDCKSNPPTYSFVQGWQLLALAVSLFVPRNNRLLWYLK 256
           +DCKSNPP YSFVQGWQLLALAVSLFVPR++RLLWYLK
Sbjct: 489 IDCKSNPPVYSFVQGWQLLALAVSLFVPRSSRLLWYLK 526


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,486,778
Number of Sequences: 53049
Number of extensions: 550024
Number of successful extensions: 913
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)