Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0437
(699 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 28 0.064
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 28 0.064
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 28 0.064
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 27 0.19
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 23 1.8
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.4
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 23 3.2
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 21 7.3
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 21 7.3
DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like pr... 21 7.3
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 9.7
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 9.7
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 9.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.7
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 21 9.7
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 28.3 bits (60), Expect = 0.064
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 287 YWRHARSIQAQSRLTADFEQH--WRHARSIQAQPRLTAGFEQHWPLQANLSTDNAN 448
Y AR I+ S L + Q W R ++ + R+ G P+ A+LST N+N
Sbjct: 277 YLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPPEPISASLSTSNSN 332
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 28.3 bits (60), Expect = 0.064
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 287 YWRHARSIQAQSRLTADFEQH--WRHARSIQAQPRLTAGFEQHWPLQANLSTDNAN 448
Y AR I+ S L + Q W R ++ + R+ G P+ A+LST N+N
Sbjct: 66 YLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPPEPISASLSTSNSN 121
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 28.3 bits (60), Expect = 0.064
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 287 YWRHARSIQAQSRLTADFEQH--WRHARSIQAQPRLTAGFEQHWPLQANLSTDNAN 448
Y AR I+ S L + Q W R ++ + R+ G P+ A+LST N+N
Sbjct: 66 YLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPPEPISASLSTSNSN 121
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 26.6 bits (56), Expect = 0.19
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 300 HAAFKLSLD-SPQTSSSTGDTHAAFKLSLDSPQASSSTGPCKLISA 434
+ +F LSL SP SS H + DSP +S CKL S+
Sbjct: 36 YRSFPLSLGMSPYASSQHHHHHLQARPPQDSPYDASVAAACKLYSS 81
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 580 LYICALS*KCRKRDSGICQLSCVVDGYPPTSLPS 479
LY+ A+ RK DSGI C D T + S
Sbjct: 13 LYLTAIYVSSRKSDSGIWYWQCNTDEETCTRISS 46
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.0 bits (47), Expect = 2.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 38 RIKNSGYHNPRILADKSTSLTVVPQQASIA 127
+I ++ +NP I A + SL V Q+ SIA
Sbjct: 1400 QIGSTSSNNPSISAFRKKSLAYVQQRMSIA 1429
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 101 VVPQQASIAASTGPSQPTHRASWSYG 178
V+P + A+S G P H +S+ G
Sbjct: 339 VLPGNYANASSVGSRNPIHTSSYMTG 364
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 23.0 bits (47), Expect = 2.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 38 RIKNSGYHNPRILADKSTSLTVVPQQASIA 127
+I ++ +NP I A + SL V Q+ SIA
Sbjct: 1400 QIGSTSSNNPSISAFRKKSLAYVQQRMSIA 1429
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 101 VVPQQASIAASTGPSQPTHRASWSYG 178
V+P + A+S G P H +S+ G
Sbjct: 339 VLPGNYANASSVGSRNPIHTSSYMTG 364
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 165 PGPTARNFTASSRRNSSSQPTTGSSTLGVTISGV 266
P P++ + ++R S+S PT S ++ + S V
Sbjct: 75 PSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSV 108
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 21.4 bits (43), Expect = 7.3
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 327 SPQTSSSTGDTHAAFKLSLDSPQASSSTGPCKLISARTTLIKKKMTRPS 473
SP S+ G+ A S + +S+ P + RTTL K T+PS
Sbjct: 136 SPILSNRFGENEEADAAS--NVISSTPLPPTTSTTTRTTLTTKFTTKPS 182
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 165 PGPTARNFTASSRRNSSSQPTTGSST 242
P P T S +S QPT S+T
Sbjct: 399 PEPQPTQTTESEPTQASEQPTESSTT 424
>DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like
protein protein.
Length = 135
Score = 21.4 bits (43), Expect = 7.3
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = -1
Query: 597 CLLFGTCIYAL 565
CL++ TC+Y++
Sbjct: 8 CLVYATCVYSV 18
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 9.7
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1
Query: 495 PHHSPPR 475
PHH PPR
Sbjct: 741 PHHQPPR 747
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 9.7
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1
Query: 495 PHHSPPR 475
PHH PPR
Sbjct: 633 PHHQPPR 639
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 101 VVPQQASIAASTGPSQPTHRASWSYG 178
V+P + A+S G P H +S+ G
Sbjct: 106 VLPGNYANASSVGSRNPIHTSSYMTG 131
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 515 RRRWLPAHITPLRD 474
RRRW+P+ I + D
Sbjct: 877 RRRWVPSTIANIMD 890
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 515 RRRWLPAHITPLRD 474
RRRW+P+ I + D
Sbjct: 877 RRRWVPSTIANIMD 890
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 515 RRRWLPAHITPLRD 474
RRRW+P+ I + D
Sbjct: 877 RRRWVPSTIANIMD 890
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 515 RRRWLPAHITPLRD 474
RRRW+P+ I + D
Sbjct: 877 RRRWVPSTIANIMD 890
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 240 TLGVTISGV 266
TLGVTISGV
Sbjct: 42 TLGVTISGV 50
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,898
Number of Sequences: 336
Number of extensions: 3636
Number of successful extensions: 23
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -