Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0435
         (440 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC133690-1|AAI33691.1|  161|Homo sapiens chromosome 9 open readi...    29   9.4  
AL162424-6|CAI14705.1|  161|Homo sapiens chromosome 9 open readi...    29   9.4  
AL162424-1|CAI14702.1|  110|Homo sapiens chromosome 9 open readi...    29   9.4  
AL162423-3|CAH73981.1|  161|Homo sapiens chromosome 9 open readi...    29   9.4  
AK128877-1|BAC87653.1|  161|Homo sapiens protein ( Homo sapiens ...    29   9.4  

>BC133690-1|AAI33691.1|  161|Homo sapiens chromosome 9 open reading
           frame 18 protein.
          Length = 161

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -3

Query: 210 AIDTNSATMRTTEKISHALHY*EKNIFYYLDGWTSSHPSWLLSG 79
           AI  N   ++ T   S  LHY EKN ++Y DG+     + +L+G
Sbjct: 56  AIWENGLAIKGTYTFSDGLHYDEKN-WHYCDGYDRRFYTEILNG 98


>AL162424-6|CAI14705.1|  161|Homo sapiens chromosome 9 open reading
           frame 18 protein.
          Length = 161

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -3

Query: 210 AIDTNSATMRTTEKISHALHY*EKNIFYYLDGWTSSHPSWLLSG 79
           AI  N   ++ T   S  LHY EKN ++Y DG+     + +L+G
Sbjct: 56  AIWENGLAIKGTYTFSDGLHYDEKN-WHYCDGYDRRFYTEILNG 98


>AL162424-1|CAI14702.1|  110|Homo sapiens chromosome 9 open reading
           frame 18 protein.
          Length = 110

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -3

Query: 210 AIDTNSATMRTTEKISHALHY*EKNIFYYLDGWTSSHPSWLLSG 79
           AI  N   ++ T   S  LHY EKN ++Y DG+     + +L+G
Sbjct: 40  AIWENGLAIKGTYTFSDGLHYDEKN-WHYCDGYDRRFYTEILNG 82


>AL162423-3|CAH73981.1|  161|Homo sapiens chromosome 9 open reading
           frame 18 protein.
          Length = 161

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -3

Query: 210 AIDTNSATMRTTEKISHALHY*EKNIFYYLDGWTSSHPSWLLSG 79
           AI  N   ++ T   S  LHY EKN ++Y DG+     + +L+G
Sbjct: 56  AIWENGLAIKGTYTFSDGLHYDEKN-WHYCDGYDRRFYTEILNG 98


>AK128877-1|BAC87653.1|  161|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46909 fis, clone NT2RP7003439. ).
          Length = 161

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -3

Query: 210 AIDTNSATMRTTEKISHALHY*EKNIFYYLDGWTSSHPSWLLSG 79
           AI  N   ++ T   S  LHY EKN ++Y DG+     + +L+G
Sbjct: 56  AIWENGLAIKGTYTFSDGLHYDEKN-WHYCDGYDRRFYTEILNG 98


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,519,921
Number of Sequences: 237096
Number of extensions: 952892
Number of successful extensions: 1370
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)