Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0434
         (352 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   6.4  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    20   8.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   8.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   8.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   8.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    20   8.5  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 212 YTPAERKTWSS 244
           YT  E KTW S
Sbjct: 254 YTETETKTWGS 264


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +2

Query: 203 IASYTPAERKTWSSGHQXXTAGAK 274
           I   TP + K W   H+  T  A+
Sbjct: 76  IIRLTPTQVKIWFQNHRYKTKRAQ 99


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 87  AKYWFKSLRPWAVFNVSYS 31
           AK W K ++ W V + +++
Sbjct: 106 AKRWPKFVKDWCVVDATFA 124


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 99  TCLDTLLLKLMFKYLSKLARRR 164
           TCLD LLL L    +    R++
Sbjct: 68  TCLDFLLLALNISTILTTVRKQ 89


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 87  AKYWFKSLRPWAVFNVSYS 31
           AK W K ++ W V + +++
Sbjct: 106 AKRWPKFVKDWCVVDATFA 124


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 168 LTFPTYYDGIIKLLH 212
           LT+P+YY+  +   H
Sbjct: 359 LTYPSYYNQDVSCTH 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,481
Number of Sequences: 336
Number of extensions: 1318
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)