Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0434
(352 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 69 7e-13
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.18
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 29 0.71
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 29 0.71
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 28 1.6
AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p4... 27 2.9
Z66495-5|CAA91272.1| 501|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical pr... 26 8.7
AL117207-2|CAB60390.1| 164|Caenorhabditis elegans Hypothetical ... 26 8.7
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 69.3 bits (162), Expect = 7e-13
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 44 LKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIASYTP 220
+K+ GL N LAE+++ +G+ S D Q+F +G AP A+ P+V RWY +ASYT
Sbjct: 5 VKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTD 64
Query: 221 AERKTWSSGHQXXTAGA 271
AERKTW+S A A
Sbjct: 65 AERKTWASAGGSAPAAA 81
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.18
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 224 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 87
QP CM + + VV+ PAP Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical protein
M01F1.7 protein.
Length = 1034
Score = 29.5 bits (63), Expect = 0.71
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 59 GLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAERKTW 238
G D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P ++K+
Sbjct: 872 GAVDVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEPLKQKSL 931
Query: 239 SSGH 250
H
Sbjct: 932 HLRH 935
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 29.5 bits (63), Expect = 0.71
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 59 GLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAERKTW 238
G D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P ++K+
Sbjct: 872 GAVDVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEPLKQKSL 931
Query: 239 SSGH 250
H
Sbjct: 932 HLRH 935
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 224 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 87
QP CM + + VV+ PA Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171
>AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p450
family protein 25A5 protein.
Length = 477
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 59 GLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPA 166
G+N LNQ L + +Y +G+ +++ V GK A
Sbjct: 93 GMNQLNQSLLQNTYATGWKHTRSAVAPIFSTGKMKA 128
>Z66495-5|CAA91272.1| 501|Caenorhabditis elegans Hypothetical
protein C36A4.6 protein.
Length = 501
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 59 GLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPA 166
G+N LNQ L + +Y +G+ +++ + GK A
Sbjct: 117 GMNQLNQSLLQNTYATGWKHTRSAIAPIFSTGKMKA 152
>Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical
protein R06A4.8 protein.
Length = 1467
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 252 WCPXDQVLRSAGVYEAI*LYHR-STW 178
WC DQV RS G+ E L ++ TW
Sbjct: 671 WCRPDQVSRSQGIIEGRNLLNKLHTW 696
>AL117207-2|CAB60390.1| 164|Caenorhabditis elegans Hypothetical
protein Y60A3A.2 protein.
Length = 164
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 203 IASYTPAERKTWSSGHQXXTAG 268
+ S TPA W+ GH TAG
Sbjct: 82 VQSCTPANSYQWTDGHTTGTAG 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,753,914
Number of Sequences: 27780
Number of extensions: 114624
Number of successful extensions: 255
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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