Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0433
         (624 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6CW16 Cluster: Similarity; n=1; Kluyveromyces lactis|R...    33   4.2  
UniRef50_Q99NE5-4 Cluster: Isoform 4 of Q99NE5 ; n=6; Tetrapoda|...    32   9.7  
UniRef50_Q18660 Cluster: Fatty acid coa synthetase family protei...    32   9.7  
UniRef50_Q9JIR4 Cluster: Regulating synaptic membrane exocytosis...    32   9.7  
UniRef50_Q99NE5 Cluster: Regulating synaptic membrane exocytosis...    32   9.7  

>UniRef50_Q6CW16 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
           Similarity - Kluyveromyces lactis (Yeast) (Candida
           sphaerica)
          Length = 503

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 166 CSTHQTEMHYCFTAEIGRXDGSYPSGLT 83
           CS+H+T+MHY F   +    G  P+GL+
Sbjct: 4   CSSHETDMHYLFNDVLQLDSGQLPAGLS 31


>UniRef50_Q99NE5-4 Cluster: Isoform 4 of Q99NE5 ; n=6;
           Tetrapoda|Rep: Isoform 4 of Q99NE5 - Mus musculus
           (Mouse)
          Length = 1374

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 147 KCIIASQQK*GGXMVPTQADSQSTLPPVQLFPTQCSPIVPQHDD 16
           KC++    K      P  A+SQ   PP+ +F   C P  P  ++
Sbjct: 55  KCVVRDMAKPAACKTPRNAESQPHQPPLNIFRCVCVPRKPSSEE 98


>UniRef50_Q18660 Cluster: Fatty acid coa synthetase family protein
           17; n=4; Caenorhabditis|Rep: Fatty acid coa synthetase
           family protein 17 - Caenorhabditis elegans
          Length = 718

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 23  CCGTIGEHCVGNSCTGGSVL-CESAWVGTIXPPYFCCEAIM 142
           CC  +  + +  +C GG++        GT+ PP  CCE ++
Sbjct: 470 CCPVVQGYGLTETCGGGTIADIHDLSTGTVGPPLTCCEILL 510


>UniRef50_Q9JIR4 Cluster: Regulating synaptic membrane exocytosis
           protein 1; n=13; Euteleostomi|Rep: Regulating synaptic
           membrane exocytosis protein 1 - Rattus norvegicus (Rat)
          Length = 1615

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 147 KCIIASQQK*GGXMVPTQADSQSTLPPVQLFPTQCSPIVPQHDD 16
           KC++    K      P  A+SQ   PP+ +F   C P  P  ++
Sbjct: 55  KCVVRDMAKPAACKTPRNAESQPHQPPLNIFRCVCVPRKPSSEE 98


>UniRef50_Q99NE5 Cluster: Regulating synaptic membrane exocytosis
           protein 1; n=11; Tetrapoda|Rep: Regulating synaptic
           membrane exocytosis protein 1 - Mus musculus (Mouse)
          Length = 1463

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 147 KCIIASQQK*GGXMVPTQADSQSTLPPVQLFPTQCSPIVPQHDD 16
           KC++    K      P  A+SQ   PP+ +F   C P  P  ++
Sbjct: 55  KCVVRDMAKPAACKTPRNAESQPHQPPLNIFRCVCVPRKPSSEE 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,006,319
Number of Sequences: 1657284
Number of extensions: 11742038
Number of successful extensions: 26710
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26697
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)