Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0433
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.6  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   7.9  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   7.9  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 472 HGFLSYDYRTIRIRFSKFHDYKFKLVLYYGINLHK 368
           HGFL+YD R +R+   +  D+   +VL +  NL K
Sbjct: 858 HGFLTYDDRQLRMFVRRNGDWT-GVVLPFPANLIK 891


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 472 HGFLSYDYRTIRIRFSKFHDYKFKLVLYYGINLHK 368
           HGFL+YD R +R+   +  D+   +VL +  NL K
Sbjct: 859 HGFLTYDDRQLRMFVRRNGDWT-GVVLPFPANLIK 892


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
 Frame = -2

Query: 350 YH*FLLSQIYILFYNKLYN----IYCGNKYTFFISKWTSXWP 237
           Y+ F    I  + Y KLYN     Y   KY    + +T+ +P
Sbjct: 168 YYFFNTDVIRTINYKKLYNPKFGFYGNGKYNVVYANYTATYP 209


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
 Frame = -2

Query: 350 YH*FLLSQIYILFYNKLYN----IYCGNKYTFFISKWTSXWP 237
           Y+ F    I  + Y KLYN     Y   KY    + +T+ +P
Sbjct: 168 YYFFNTDVIRTINYKKLYNPKFGFYGNGKYNVVYANYTATYP 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,143
Number of Sequences: 2352
Number of extensions: 12722
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)