Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0433
         (624 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001729-1|AAN71484.1|  379|Drosophila melanogaster RE70417p pro...    29   6.8  
AF145595-1|AAD38570.1|  300|Drosophila melanogaster wun protein.       29   6.8  
AE013599-858|AAM71066.1|  300|Drosophila melanogaster CG8804-PA,...    29   6.8  
AE013599-857|AAF58942.2|  379|Drosophila melanogaster CG8804-PB,...    29   6.8  
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC...    25   8.6  
U73822-1|AAC47449.1|  300|Drosophila melanogaster wunen protein.       28   8.9  

>BT001729-1|AAN71484.1|  379|Drosophila melanogaster RE70417p
           protein.
          Length = 379

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +3

Query: 15  HHRAAVL*ANIVLGIVALVVAYFVSPLG*EPSSLPISA 128
           HH + VL  +++  I ALVVA +VS L  +P++ P  A
Sbjct: 323 HHWSDVLAGSLIGSISALVVANYVSDLFQKPNTKPYLA 360


>AF145595-1|AAD38570.1|  300|Drosophila melanogaster wun protein.
          Length = 300

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +3

Query: 15  HHRAAVL*ANIVLGIVALVVAYFVSPLG*EPSSLPISA 128
           HH + VL  +++  I ALVVA +VS L  +P++ P  A
Sbjct: 244 HHWSDVLAGSLIGSISALVVANYVSDLFQKPNTKPYLA 281


>AE013599-858|AAM71066.1|  300|Drosophila melanogaster CG8804-PA,
           isoform A protein.
          Length = 300

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +3

Query: 15  HHRAAVL*ANIVLGIVALVVAYFVSPLG*EPSSLPISA 128
           HH + VL  +++  I ALVVA +VS L  +P++ P  A
Sbjct: 244 HHWSDVLAGSLIGSISALVVANYVSDLFQKPNTKPYLA 281


>AE013599-857|AAF58942.2|  379|Drosophila melanogaster CG8804-PB,
           isoform B protein.
          Length = 379

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +3

Query: 15  HHRAAVL*ANIVLGIVALVVAYFVSPLG*EPSSLPISA 128
           HH + VL  +++  I ALVVA +VS L  +P++ P  A
Sbjct: 323 HHWSDVLAGSLIGSISALVVANYVSDLFQKPNTKPYLA 360


>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
            protein.
          Length = 4699

 Score = 24.6 bits (51), Expect(2) = 8.6
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 2    GTRLSSSCCGTIGEHCVGNSC 64
            G R      G  GEHC  NSC
Sbjct: 4381 GQRQCKCPSGYFGEHCESNSC 4401



 Score = 21.8 bits (44), Expect(2) = 8.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 83   CESAWVGTIXPPYFC 127
            CES    T  PP+FC
Sbjct: 4431 CESDLCKTSSPPHFC 4445


>U73822-1|AAC47449.1|  300|Drosophila melanogaster wunen protein.
          Length = 300

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +3

Query: 15  HHRAAVL*ANIVLGIVALVVAYFVSPLG*EPSSLP 119
           HH + VL  +++  I ALVVA +VS L  +P++ P
Sbjct: 244 HHWSDVLAGSLIGSISALVVANYVSDLFXKPNTKP 278


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,522,084
Number of Sequences: 53049
Number of extensions: 544536
Number of successful extensions: 1012
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)