Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0433
         (624 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   9.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   9.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.8  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 48  VLGIVALVVAYFVSPL 95
           VLG+   +++YF+ P+
Sbjct: 444 VLGVQGALLSYFIEPI 459


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 42  NIVLGIVALVVAYFV 86
           N++  +VA+VVA+F+
Sbjct: 282 NVIRMLVAVVVAFFI 296


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 460 SYDYRTIRIRFSKFHDYKFKLVLYYG 383
           S D RT+R++    +   +K+++Y G
Sbjct: 298 SVDDRTLRLKGQMIYMDNWKMMMYLG 323


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -2

Query: 608 TMSVPDTYEQ-RPGALTSLYYRIFLNLSVSLSFILNWMYA 492
           TM  P  +   +  +L  L+YR    LS S S  +N MYA
Sbjct: 346 TMGPPHHHHHHQTQSLQHLHYRQPPTLSESYSSYVNSMYA 385


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,597
Number of Sequences: 438
Number of extensions: 4102
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)