Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0431
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CB411 Cluster: hypothetical protein TTHERM_0047...    35   1.7  
UniRef50_Q4DP66 Cluster: Putative uncharacterized protein; n=2; ...    35   2.2  
UniRef50_O77372 Cluster: Putative uncharacterized protein MAL3P6...    35   2.2  
UniRef50_Q8TUN8 Cluster: Predicted protein; n=1; Methanosarcina ...    35   2.2  
UniRef50_A7QNU2 Cluster: Chromosome undetermined scaffold_134, w...    33   6.7  
UniRef50_Q245S4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  
UniRef50_Q98PY1 Cluster: Putative uncharacterized protein MYPU_5...    33   8.9  

>UniRef50_UPI00006CB411 Cluster: hypothetical protein
           TTHERM_00475020; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00475020 - Tetrahymena
           thermophila SB210
          Length = 274

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 15/56 (26%), Positives = 33/56 (58%)
 Frame = -3

Query: 449 SFHSFYSYTVTSCKFXLNFEGFSLGRCFLKQFSRYLFFALRFFNVTFFNINTCFCI 282
           +F+ +Y+Y +      +N +G  +  C LK++++++FF+L +F     ++N  F I
Sbjct: 39  AFNIYYNYAIRVENQNMN-QGVFILICMLKRYNKFVFFSLLYFQTFIRDVNIFFSI 93


>UniRef50_Q4DP66 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 192

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 440 SFYSYTVTSCKFXLNFEGFSLGR-CFLKQFSRYLFFALRFFNVTFFNIN 297
           SF+SY +TSC      EGF   R CF   FS + FF      V++FN N
Sbjct: 141 SFFSYIITSCLSDWGKEGFLWRRLCFFLFFS-FSFFFFFLLCVSYFNRN 188


>UniRef50_O77372 Cluster: Putative uncharacterized protein MAL3P6.23;
            n=3; Eukaryota|Rep: Putative uncharacterized protein
            MAL3P6.23 - Plasmodium falciparum (isolate 3D7)
          Length = 4981

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 30/128 (23%), Positives = 50/128 (39%)
 Frame = +2

Query: 113  INSLDVVIYPRELTIHLTTKILPI*Y*LHEGIDLSSPKLFMNEYNRNFNIFQKISHLYKS 292
            +N+L   I+ +   I +    L + Y L E  D+ S KL MN        + K  ++   
Sbjct: 3292 VNTLLCCIHNKNKHISMNGLYLLMYYILKEHFDIESIKLLMNRVFDELFYYTK-RNILNE 3350

Query: 293  MCLY*KT*R*RNVTQKTNILKIVLKNNVQEKSPQN*XKIYSW*PCKNKRSGMTFCQYYQQ 472
             CL  +        +KTN    +  NN    +  N  + Y+    K  +   T  +YY  
Sbjct: 3351 KCLKRRQKSEEEEEEKTNKKNKINNNNHNNNNNNNVVEAYNNDQLKQNKLNNTIGEYYNI 3410

Query: 473  IXTNISSN 496
            +  N+  N
Sbjct: 3411 MHNNMKKN 3418


>UniRef50_Q8TUN8 Cluster: Predicted protein; n=1; Methanosarcina
           acetivorans|Rep: Predicted protein - Methanosarcina
           acetivorans
          Length = 144

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -3

Query: 386 FSLGRCFLKQFSRYLFFALRFFNVTFFNIN 297
           F + R  + +FSR  FF L FFN++FFNI+
Sbjct: 44  FLIYRFLIYRFSRIPFFRLPFFNISFFNIS 73


>UniRef50_A7QNU2 Cluster: Chromosome undetermined scaffold_134,
           whole genome shotgun sequence; n=6; Magnoliophyta|Rep:
           Chromosome undetermined scaffold_134, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 731

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 54  LGHNSKTVTPSYKVQYSFAKLTALMLLFIHVNSQYTLQPKFYRFNI-NYTKASIFPRRSY 230
           L H    + P  K    +A    L   +I V  +++L PKF   +   ++ +S FPR + 
Sbjct: 54  LSHLCVVLIPPKKFPRKYASAHLLRFPYISVTQRFSLSPKFATISCQTFSNSSSFPRMNM 113

Query: 231 S*MNIIETL 257
              N++E L
Sbjct: 114 HLANMLEKL 122


>UniRef50_Q245S4 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1995

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
 Frame = +3

Query: 321  EET*RKKQIS*KLF*KTTSKRKALKIKXKFTAGNRVRIKGVE*HFVS---ITSKLXQIYR 491
            EE  +KK I   +  ++  K + ++ K +F   NRVR KG+   F     +  K  +I++
Sbjct: 1815 EEVSQKKIIDISI--QSKQKFQLIRSKTQFIENNRVR-KGISSFFCQNNELNQKYKKIHQ 1871

Query: 492  ATDLYLRWXGVGGK*SLYYRIKCIIYTSDSQPLCRGTFVCRQISKVCRQI 641
             +  Y+             R K IIY +D Q +C+  F+ + + K  +++
Sbjct: 1872 KSKKYIEKDQDTSDVRRSLRKKYIIYITDEQNICQINFMFKSMVKELQEL 1921


>UniRef50_Q98PY1 Cluster: Putative uncharacterized protein
           MYPU_5880; n=1; Mycoplasma pulmonis|Rep: Putative
           uncharacterized protein MYPU_5880 - Mycoplasma pulmonis
          Length = 316

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 356 FSRYLFFALRFFNVTFFNINTCF 288
           F+ Y F+   FFN+ FF+ +TCF
Sbjct: 15  FNIYFFYFFSFFNIDFFSFSTCF 37


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,826,510
Number of Sequences: 1657284
Number of extensions: 12744137
Number of successful extensions: 28928
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28909
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)