Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0431
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.3  
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    24   4.0  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   5.3  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   9.2  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +3

Query: 177 YRFNINYTKASIFPRRSYS*MNIIETL 257
           +RFN+NY +A  +P   Y  M++ +++
Sbjct: 159 FRFNVNYAQAEDYPVDLYYLMDLSKSM 185


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 357 IFKIFVFCVTFLQRYVFQYK--HMLLYKCDIFWKIL 256
           IF  F F +TFL+RY F     ++L+    + W I+
Sbjct: 69  IFAGFAFLMTFLKRYGFSASGLNLLVAALVVQWAII 104


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 212 LSSPKLFMNEYNRNFNIFQKISHLYKSMCL 301
           L S  L  N+Y  NFNIF +   L  +  L
Sbjct: 287 LKSVPLSSNDYVDNFNIFTEFGELTPAQVL 316


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 612 GTQKCRGTVVENHWYR 565
           GT+  R TV + HW R
Sbjct: 375 GTRSTRNTVSKKHWMR 390


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,624
Number of Sequences: 2352
Number of extensions: 14327
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)