Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0431
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128471-1|AAM75064.1| 1204|Drosophila melanogaster RE24967p pro...    30   3.5  
AE013599-3599|AAF47000.2| 1204|Drosophila melanogaster CG3520-PA...    30   3.5  
AE014297-3099|AAN13902.1|  595|Drosophila melanogaster CG31164-P...    29   6.1  

>AY128471-1|AAM75064.1| 1204|Drosophila melanogaster RE24967p protein.
          Length = 1204

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 303  YKHMLLYKCD-IFWKILKFRLYSFMNNFGEERSMPS 199
            +   L Y CD +FWK  + ++Y F+ N  +  +MP+
Sbjct: 1136 FPESLQYLCDHVFWKDQEAKIYEFLFNLYKHTTMPA 1171


>AE013599-3599|AAF47000.2| 1204|Drosophila melanogaster CG3520-PA
            protein.
          Length = 1204

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 303  YKHMLLYKCD-IFWKILKFRLYSFMNNFGEERSMPS 199
            +   L Y CD +FWK  + ++Y F+ N  +  +MP+
Sbjct: 1136 FPESLQYLCDHVFWKDQEAKIYEFLFNLYKHTTMPA 1171


>AE014297-3099|AAN13902.1|  595|Drosophila melanogaster CG31164-PA
           protein.
          Length = 595

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 681 RYNLIIQHYYILAKFGGTLLKFGGTQKCR 595
           RY+L IQH+++     GTL  FGG   C+
Sbjct: 359 RYSLSIQHFFVFMSLFGTL--FGGFFDCK 385


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,182,450
Number of Sequences: 53049
Number of extensions: 588066
Number of successful extensions: 1212
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)