Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0429
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    26   0.34 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.79 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.2  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 641 CLWTKNXTRVFIYFAW 688
           C WT   ++V +Y AW
Sbjct: 149 CSWTSRRSKVMVYLAW 164


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 350 CFFYXFNVFIMYN*HSALLLNILY 279
           C +Y +  FI++  H  LL+ I Y
Sbjct: 237 CIYYFYYAFILFTVHLLLLVCIYY 260



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 346 FSXDLMYLLCIINILRSFSIF 284
           F   L+ LLCI    R+F IF
Sbjct: 288 FYCALIILLCIYYFCRAFIIF 308


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 60  VLKDLKFIFFFQLDIFGCQYVSN 128
           +L    F+ F   +I+ CQ VSN
Sbjct: 183 ILTQAIFLMFVSYNIYVCQTVSN 205


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 60  VLKDLKFIFFFQLDIFGCQYVSN 128
           +L    F+ F   +I+ CQ VSN
Sbjct: 109 ILTQAIFLMFVSYNIYVCQTVSN 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,637
Number of Sequences: 336
Number of extensions: 3588
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)