Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0425
         (517 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   2.6  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      24   3.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   4.6  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 139  LKIVIFIQK*QMRAGFHSIWKVRI 68
            L +V+F+ + +MR  FHS + VR+
Sbjct: 1045 LTLVLFVFRQEMRVWFHSKFGVRL 1068


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +3

Query: 30  ISDLI*LMRYSDSIRTFQME*KPARICYFCINMTIFRC-FYHDFLLS 167
           I+ L+ L+ Y D  R  + + +P      C+ +  F C ++H   LS
Sbjct: 151 ITSLLNLLMYLDDARRNRRDRQPCCSTLLCVVVVPFCCRYWHSLRLS 197


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +2

Query: 164  VIMICVEFFNNYFYSGAQQSHCLLRINRTVK 256
            ++++CV   + +F SGA     +LR+ R ++
Sbjct: 930  LLVVCVSLISMFFSSGAISVIKILRVLRVLR 960


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,799
Number of Sequences: 2352
Number of extensions: 8507
Number of successful extensions: 60
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)