Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0425
         (517 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061353-1|AAL28901.1|  687|Drosophila melanogaster LD28117p pro...    28   6.5  
AE014298-2173|AAF48473.2|  687|Drosophila melanogaster CG9213-PA...    28   6.5  
BT023382-1|AAY55798.1|  265|Drosophila melanogaster IP10372p pro...    28   8.6  
BT023334-1|AAY55750.1|  265|Drosophila melanogaster IP10172p pro...    28   8.6  
AE014297-1054|AAF54463.2|  265|Drosophila melanogaster CG9459-PA...    28   8.6  

>AY061353-1|AAL28901.1|  687|Drosophila melanogaster LD28117p
           protein.
          Length = 687

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 200 FYSGAQQSHCLLRINRTVKCCYRSSRE-WSSINH 298
           +Y G Q  HC+L   + V CC +   + W  I++
Sbjct: 500 WYMGLQSGHCILTTLQHVPCCTQLDEDAWEEISN 533


>AE014298-2173|AAF48473.2|  687|Drosophila melanogaster CG9213-PA
           protein.
          Length = 687

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 200 FYSGAQQSHCLLRINRTVKCCYRSSRE-WSSINH 298
           +Y G Q  HC+L   + V CC +   + W  I++
Sbjct: 500 WYMGLQSGHCILTTLQHVPCCTQLDEDAWEEISN 533


>BT023382-1|AAY55798.1|  265|Drosophila melanogaster IP10372p
           protein.
          Length = 265

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +2

Query: 107 LLFLYKYDYF*V-FLSRFFTVIMICVEFFNNYFYSGAQQSHCLLRINRTVKCCYRSSREW 283
           + F+++  Y  + FL  F  V M+ + F   Y+Y        L+  N  V     +    
Sbjct: 124 VFFIFRKKYRQISFLHVFHHVYMVYIGFLYMYYYGYGGHGFFLITFNVVVHTMMYTYYYQ 183

Query: 284 SSINHSSG 307
           SS+N +SG
Sbjct: 184 SSLNRNSG 191


>BT023334-1|AAY55750.1|  265|Drosophila melanogaster IP10172p
           protein.
          Length = 265

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +2

Query: 107 LLFLYKYDYF*V-FLSRFFTVIMICVEFFNNYFYSGAQQSHCLLRINRTVKCCYRSSREW 283
           + F+++  Y  + FL  F  V M+ + F   Y+Y        L+  N  V     +    
Sbjct: 124 VFFIFRKKYRQISFLHVFHHVYMVYIGFLYMYYYGYGGHGFFLITFNVVVHTMMYTYYYQ 183

Query: 284 SSINHSSG 307
           SS+N +SG
Sbjct: 184 SSLNRNSG 191


>AE014297-1054|AAF54463.2|  265|Drosophila melanogaster CG9459-PA
           protein.
          Length = 265

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +2

Query: 107 LLFLYKYDYF*V-FLSRFFTVIMICVEFFNNYFYSGAQQSHCLLRINRTVKCCYRSSREW 283
           + F+++  Y  + FL  F  V M+ + F   Y+Y        L+  N  V     +    
Sbjct: 124 VFFIFRKKYRQISFLHVFHHVYMVYIGFLYMYYYGYGGHGFFLITFNVVVHTMMYTYYYQ 183

Query: 284 SSINHSSG 307
           SS+N +SG
Sbjct: 184 SSLNRNSG 191


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,138,947
Number of Sequences: 53049
Number of extensions: 332134
Number of successful extensions: 689
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)