Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0424
(544 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UGP7 Cluster: Melanocyte cDNA, RIKEN full-length enri... 115 8e-25
UniRef50_P03734 Cluster: Minor tail protein G; n=19; root|Rep: M... 63 3e-09
UniRef50_O64327 Cluster: Gp13; n=2; root|Rep: Gp13 - Bacteriopha... 50 3e-05
UniRef50_A1AAL5 Cluster: Putative uncharacterized protein; n=2; ... 50 5e-05
UniRef50_Q8ZN04 Cluster: Gifsy-1 prophage protein; n=20; Enterob... 46 6e-04
UniRef50_Q8X3I4 Cluster: Minor tail protein; n=4; root|Rep: Mino... 44 0.002
UniRef50_O64328 Cluster: Gp14; n=1; Enterobacteria phage N15|Rep... 38 0.15
UniRef50_Q5WID3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.20
UniRef50_Q7ARF1 Cluster: Putative uncharacterized protein YPMT1.... 37 0.26
UniRef50_Q47R38 Cluster: Tyrosine protein kinase:Serine/threonin... 37 0.26
UniRef50_Q934I7 Cluster: MS115, putative beta-agarase; n=1; Micr... 37 0.35
UniRef50_Q97HA5 Cluster: Contains cell adhesion domain; n=1; Clo... 36 0.46
UniRef50_A1R5E2 Cluster: Putative Serine/threonine-protein kinas... 36 0.46
UniRef50_Q6JV24 Cluster: Alpha-fucosidase; n=4; Bifidobacterium ... 36 0.80
UniRef50_A4CKG7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.80
UniRef50_Q8ZN05 Cluster: Gifsy-1 prophage protein; n=15; root|Re... 35 1.1
UniRef50_A5FKN4 Cluster: Ig domain protein, group 2 domain prote... 35 1.1
UniRef50_A1ZSR6 Cluster: FG-GAP repeat domain protein; n=1; Micr... 35 1.1
UniRef50_A1R2D1 Cluster: Putative lipoprotein; n=1; Arthrobacter... 35 1.1
UniRef50_Q74BG8 Cluster: EF hand domain/PKD domain protein; n=1;... 35 1.4
UniRef50_Q39X49 Cluster: Putative uncharacterized protein precur... 35 1.4
UniRef50_A6L8V0 Cluster: Putative uncharacterized protein; n=2; ... 34 1.8
UniRef50_A7AE79 Cluster: Putative uncharacterized protein; n=1; ... 34 2.4
UniRef50_Q8ZQ88 Cluster: Gifsy-2 prophage probable minor tail pr... 33 4.3
UniRef50_A5FE73 Cluster: Conserved repeat domain precursor; n=1;... 32 7.4
UniRef50_Q389A9 Cluster: Putative uncharacterized protein; n=1; ... 32 7.4
UniRef50_UPI000050F9A5 Cluster: hypothetical protein BlinB010007... 32 9.8
UniRef50_Q6C5E7 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 32 9.8
UniRef50_A3CWJ6 Cluster: Putative uncharacterized protein precur... 32 9.8
>UniRef50_Q3UGP7 Cluster: Melanocyte cDNA, RIKEN full-length
enriched library, clone:G270054J13 product:hypothetical
protein, full insert sequence; n=2; cellular
organisms|Rep: Melanocyte cDNA, RIKEN full-length
enriched library, clone:G270054J13 product:hypothetical
protein, full insert sequence - Mus musculus (Mouse)
Length = 118
Score = 115 bits (276), Expect = 8e-25
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = -2
Query: 183 TPFTVMVIPXTDTVAFVLSADTARKLXAVTPSGXKATVSVVLCPFTTEVLAGVTVMPVAA 4
TPFTVMVIP TDTVAFVLSADTARKL +VTPSG KATVSVVLCPFTTEVLAGVTVMPVAA
Sbjct: 8 TPFTVMVIPLTDTVAFVLSADTARKLLSVTPSGWKATVSVVLCPFTTEVLAGVTVMPVAA 67
Query: 3 V 1
V
Sbjct: 68 V 68
>UniRef50_P03734 Cluster: Minor tail protein G; n=19; root|Rep:
Minor tail protein G - Bacteriophage lambda
Length = 140
Score = 63.3 bits (147), Expect = 3e-09
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +2
Query: 284 MFLKTESF*HNGVTVTLSELSXLQRXEHLALMKR 385
MFLKTESF HNGVTVTLSELS LQR EHLALMKR
Sbjct: 1 MFLKTESFEHNGVTVTLSELSALQRIEHLALMKR 34
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/39 (76%), Positives = 31/39 (79%)
Frame = +3
Query: 420 KFTVEDAIRXGAFLVAMSLWHNHSAEDADASMNEAV*QI 536
KFTVEDAIR GAFLVAMSLWHNH + SMNEAV QI
Sbjct: 46 KFTVEDAIRTGAFLVAMSLWHNHPQKTQMPSMNEAVKQI 84
>UniRef50_O64327 Cluster: Gp13; n=2; root|Rep: Gp13 - Bacteriophage
N15
Length = 245
Score = 50.4 bits (115), Expect = 3e-05
Identities = 24/60 (40%), Positives = 37/60 (61%)
Frame = +2
Query: 5 AATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTITVNGV 184
A TG+++ ++ +V +T L V+ P + SFR S+D +KATV+V G T+TV GV
Sbjct: 161 AVTGISLDKSTAAVAVAATTQLVVSVLPASASDKSFRVASSDPSKATVTVSGNTLTVTGV 220
>UniRef50_A1AAL5 Cluster: Putative uncharacterized protein; n=2;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli O1:K1 / APEC
Length = 444
Score = 49.6 bits (113), Expect = 5e-05
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = -1
Query: 526 TASFMDASASSAEWLCHRDIATRNAPFLMASSTV 425
TASF+D WLCHRDIATRNAP L SST+
Sbjct: 141 TASFIDGDCVFCGWLCHRDIATRNAPVLTRSSTL 174
>UniRef50_Q8ZN04 Cluster: Gifsy-1 prophage protein; n=20;
Enterobacteriaceae|Rep: Gifsy-1 prophage protein -
Salmonella typhimurium
Length = 248
Score = 46.0 bits (104), Expect = 6e-04
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +2
Query: 5 AATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTITVNGV 184
+ +G+TV PAS +V G +TTLT P+ + + + +AD ATV++ TV GV
Sbjct: 162 SVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGV 221
>UniRef50_Q8X3I4 Cluster: Minor tail protein; n=4; root|Rep: Minor
tail protein - Escherichia coli O157:H7
Length = 140
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +2
Query: 284 MFLKTESF*HNGVTVTLSELSXLQRXEHL 370
MFLKTE F +NGV+VTLSELS LQR +++
Sbjct: 1 MFLKTEQFEYNGVSVTLSELSALQRFDYI 29
>UniRef50_O64328 Cluster: Gp14; n=1; Enterobacteria phage N15|Rep:
Gp14 - Bacteriophage N15
Length = 140
Score = 37.9 bits (84), Expect = 0.15
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +2
Query: 284 MFLKTESF*HNGVTVTLSELSXLQRXEHLALMKR 385
MFLK+E NG +VTL +LS LQR EHL +K+
Sbjct: 1 MFLKSELLECNGSSVTLFQLSALQRIEHLEYLKQ 34
Score = 31.9 bits (69), Expect = 9.8
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 441 IRXGAFLVAMSLWHNH 488
++ GA+LVAMSLWH H
Sbjct: 51 VKSGAYLVAMSLWHGH 66
>UniRef50_Q5WID3 Cluster: Putative uncharacterized protein; n=1;
Bacillus clausii KSM-K16|Rep: Putative uncharacterized
protein - Bacillus clausii (strain KSM-K16)
Length = 160
Score = 37.5 bits (83), Expect = 0.20
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 11 TGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTITVNGV 184
T +T++ + ++ +G + TLT P T + R ++D+ ATVS G T+ GV
Sbjct: 62 TSVTLSQKTMTLEEGATKTLTATVEPSNATDKTVRYTTSDREIATVSTSGEVRTITGV 119
>UniRef50_Q7ARF1 Cluster: Putative uncharacterized protein
YPMT1.20c; n=10; Enterobacteriaceae|Rep: Putative
uncharacterized protein YPMT1.20c - Yersinia pestis
Length = 220
Score = 37.1 bits (82), Expect = 0.26
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = +2
Query: 17 MTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXG 160
+TVTP STSV KG+S L V P T S + KATV G
Sbjct: 138 VTVTPDSTSVEKGKSVKLRVDVQPSNATNKKVTWTSKNSDKATVDQNG 185
>UniRef50_Q47R38 Cluster: Tyrosine protein kinase:Serine/threonine
protein kinase:PASTA; n=1; Thermobifida fusca YX|Rep:
Tyrosine protein kinase:Serine/threonine protein
kinase:PASTA - Thermobifida fusca (strain YX)
Length = 672
Score = 37.1 bits (82), Expect = 0.26
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +2
Query: 32 ASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTITVNGV 184
A T+V GQS TLTV+ PE V R DK + + G +TV+ V
Sbjct: 576 AETTVGAGQSVTLTVSSGPELVEVPDIRGWKVDKARKELEERGFEVTVHQV 626
>UniRef50_Q934I7 Cluster: MS115, putative beta-agarase; n=1;
Microscilla sp. PRE1|Rep: MS115, putative beta-agarase -
Microscilla sp. PRE1
Length = 1330
Score = 36.7 bits (81), Expect = 0.35
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +2
Query: 11 TGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTITVNG 181
TG++VTP S S++ GQS LT P T S +++ TV+ G+ +T G
Sbjct: 795 TGVSVTPTSASLLVGQSIDLTETVSPTNATDKSVTWTTSNSAVVTVNGSGL-VTAKG 850
Score = 34.3 bits (75), Expect = 1.8
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 5 AATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXG 160
A TG+TV+P S +V +G + +T P T S S++ A+V+ G
Sbjct: 707 AVTGVTVSPGSPTVAQGSTVQMTAHVQPTNATDQSVTWSSSNANVASVNASG 758
>UniRef50_Q97HA5 Cluster: Contains cell adhesion domain; n=1;
Clostridium acetobutylicum|Rep: Contains cell adhesion
domain - Clostridium acetobutylicum
Length = 439
Score = 36.3 bits (80), Expect = 0.46
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 2 TAATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTITV 175
T ATG+T+ ++S+ GQ+ TLT A P T + S+D TV G V
Sbjct: 198 TLATGITLNKNTSSLEVGQTDTLTAAVTPNDTTNKAVTWTSSDPNVVTVDSNGKVTAV 255
>UniRef50_A1R5E2 Cluster: Putative Serine/threonine-protein kinase;
n=1; Arthrobacter aurescens TC1|Rep: Putative
Serine/threonine-protein kinase - Arthrobacter aurescens
(strain TC1)
Length = 688
Score = 36.3 bits (80), Expect = 0.46
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +2
Query: 29 PASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTITVNGV 184
PA+ ++V+G++ TLTV+ P+ V SF AD+ + + G + VN V
Sbjct: 608 PANGTLVRGEAVTLTVSKGPKLVKVPSFIGKQADEAEKELKKLGFKVQVNKV 659
>UniRef50_Q6JV24 Cluster: Alpha-fucosidase; n=4; Bifidobacterium
bifidum|Rep: Alpha-fucosidase - Bifidobacterium bifidum
Length = 1959
Score = 35.5 bits (78), Expect = 0.80
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +2
Query: 11 TGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTIT 172
TG+TVT A+T+ G + TLT P T S ++D ATV+ G+ T
Sbjct: 1480 TGVTVTGANTATA-GDTVTLTATVAPANATDKSVTWSTSDAAVATVNANGVVTT 1532
>UniRef50_A4CKG7 Cluster: Putative uncharacterized protein; n=1;
Robiginitalea biformata HTCC2501|Rep: Putative
uncharacterized protein - Robiginitalea biformata
HTCC2501
Length = 1160
Score = 35.5 bits (78), Expect = 0.80
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +2
Query: 5 AATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXG 160
A TG+TVTP +++ G++ T A P T S S+D + A VS G
Sbjct: 828 AVTGVTVTPGDATLLIGETLQFTAAVLPADATNKSVSWSSSDPSVAIVSGNG 879
>UniRef50_Q8ZN05 Cluster: Gifsy-1 prophage protein; n=15; root|Rep:
Gifsy-1 prophage protein - Salmonella typhimurium
Length = 131
Score = 35.1 bits (77), Expect = 1.1
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +2
Query: 284 MFLKTESF*HNGVTVTLSELSXLQRXEHLALMKR 385
MFL T++F + G ++ LSELS LQR ++L +++
Sbjct: 1 MFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQ 34
>UniRef50_A5FKN4 Cluster: Ig domain protein, group 2 domain protein
precursor; n=5; root|Rep: Ig domain protein, group 2
domain protein precursor - Flavobacterium johnsoniae
UW101
Length = 1048
Score = 35.1 bits (77), Expect = 1.1
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 5 AATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTITV 175
A TG++V+PA+ +V G + L A P T + S++ ATV+ G+ V
Sbjct: 475 AVTGVSVSPATATVGLGTTQQLNAAIAPANATNQNVTWTSSNTAVATVNASGLVTAV 531
>UniRef50_A1ZSR6 Cluster: FG-GAP repeat domain protein; n=1;
Microscilla marina ATCC 23134|Rep: FG-GAP repeat domain
protein - Microscilla marina ATCC 23134
Length = 1461
Score = 35.1 bits (77), Expect = 1.1
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 2 TAATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTITVNG 181
T A G+TVTP T++ G++ + T+ GVT F + T + +T+T
Sbjct: 924 TPAVGLTVTPDKTTICSGETVSFTITGSTNGVTYQLFSGSANTGNPITSTGGDITLTTGA 983
Query: 182 V 184
+
Sbjct: 984 L 984
>UniRef50_A1R2D1 Cluster: Putative lipoprotein; n=1; Arthrobacter
aurescens TC1|Rep: Putative lipoprotein - Arthrobacter
aurescens (strain TC1)
Length = 382
Score = 35.1 bits (77), Expect = 1.1
Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Frame = +1
Query: 7 GNRHDRDACQHLGG--ERAEHHADRGLXAGGRNRXE--LSCGVCG*NKSHRVGXWYDHHR 174
G R R +C H GG R GGR R LSC G + R W D +R
Sbjct: 234 GRRRRRLSCSHRGGGRRRLSRRLSCSHRGGGRRRRRRRLSCSHRGGGRRRRRLSWSDRYR 293
Query: 175 ERRXLQAR 198
RR AR
Sbjct: 294 RRRGCGAR 301
>UniRef50_Q74BG8 Cluster: EF hand domain/PKD domain protein; n=1;
Geobacter sulfurreducens|Rep: EF hand domain/PKD domain
protein - Geobacter sulfurreducens
Length = 1779
Score = 34.7 bits (76), Expect = 1.4
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Frame = +2
Query: 26 TPASTSVVKGQSTTLTVAFXPEG----VTASSFRAVSADKTKATVSVXGMTITVNG 181
TPA+ +V+ + TL+V F P +AS+ +++ DK A+VS+ G++ T +G
Sbjct: 978 TPAAGTVLNAGTRTLSVVFTPSDPNAYTSASATVSLTVDKAVASVSLTGLSATYDG 1033
>UniRef50_Q39X49 Cluster: Putative uncharacterized protein precursor;
n=1; Geobacter metallireducens GS-15|Rep: Putative
uncharacterized protein precursor - Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Length = 2636
Score = 34.7 bits (76), Expect = 1.4
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 26 TPASTSVVKGQSTTLTVAFXPEG----VTASSFRAVSADKTKATVSVXGMTITVNG 181
TPAS +V+ S TL+V F P TA+ ++ + ATV++ G+T T +G
Sbjct: 1630 TPASGTVLNAGSQTLSVTFTPTDTATYTTATKTVTLTVNPASATVTLAGLTATYDG 1685
Score = 34.7 bits (76), Expect = 1.4
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 26 TPASTSVVKGQSTTLTVAFXPEG----VTASSFRAVSADKTKATVSVXGMTITVNG 181
TPAS +V+ S TL+V F P TA+ ++ + ATV++ G+T T +G
Sbjct: 1856 TPASGTVLNAGSQTLSVTFTPTDTATYTTATKTVTLTVNPASATVTLAGLTATYDG 1911
Score = 34.3 bits (75), Expect = 1.8
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Frame = +2
Query: 26 TPASTSVVKGQSTTLTVAFXPEG----VTASSFRAVSADKTKATVSVXGMTITVNG 181
TPA+ +V+ S TL+V F P TA+ +++ +K AT+++ G++ T +G
Sbjct: 1401 TPAAGTVLNAGSQTLSVTFTPTDTATYTTATKTVSLTVNKASATITLSGLSATYDG 1456
>UniRef50_A6L8V0 Cluster: Putative uncharacterized protein; n=2;
Parabacteroides|Rep: Putative uncharacterized protein -
Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
/ NCTC11152)
Length = 547
Score = 34.3 bits (75), Expect = 1.8
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 5 AATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTITVNG 181
A + + V+P + ++ G+STTL+ P T + ++D+ ATV +T G
Sbjct: 36 AVSAVAVSPTTATIKVGESTTLSATITPSDATDKTVTWSTSDEKVATVDAGKVTAVAEG 94
>UniRef50_A7AE79 Cluster: Putative uncharacterized protein; n=1;
Parabacteroides merdae ATCC 43184|Rep: Putative
uncharacterized protein - Parabacteroides merdae ATCC
43184
Length = 512
Score = 33.9 bits (74), Expect = 2.4
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 5 AATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATV 148
+ TG+T+TP + ++ G + TLT PE ++ S+D AT+
Sbjct: 33 SVTGVTITPTTLTLKAGTTGTLTATVVPENAAVTTVAWSSSDTNIATI 80
>UniRef50_Q8ZQ88 Cluster: Gifsy-2 prophage probable minor tail
protein; n=2; Salmonella|Rep: Gifsy-2 prophage probable
minor tail protein - Salmonella typhimurium
Length = 132
Score = 33.1 bits (72), Expect = 4.3
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 284 MFLKTESF*HNGVTVTLSELSXLQRXEHLALMKR 385
MFLK E+F +V L ELS LQR E+L +++
Sbjct: 1 MFLKKETFTRGDASVALFELSGLQRIEYLEFIQK 34
>UniRef50_A5FE73 Cluster: Conserved repeat domain precursor; n=1;
Flavobacterium johnsoniae UW101|Rep: Conserved repeat
domain precursor - Flavobacterium johnsoniae UW101
Length = 3737
Score = 32.3 bits (70), Expect = 7.4
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 20 TVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKAT-VSVXGMTITVNGVFCRQ 196
TVTP+ +++ GQSTTLTV G T + + A + T + +T N + +
Sbjct: 716 TVTPSPSTICNGQSTTLTVDAPVAGTTYNWYDAATGGNLVFTGTAFTTPALTANITYYVE 775
Query: 197 GQHSGC 214
GC
Sbjct: 776 AVIGGC 781
>UniRef50_Q389A9 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 892
Score = 32.3 bits (70), Expect = 7.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 445 EXARFWWRCPCGITIPQKTQ 504
E ++FWWRC CG +P Q
Sbjct: 486 ERSQFWWRCGCGTQLPSCAQ 505
>UniRef50_UPI000050F9A5 Cluster: hypothetical protein BlinB01000734;
n=1; Brevibacterium linens BL2|Rep: hypothetical protein
BlinB01000734 - Brevibacterium linens BL2
Length = 228
Score = 31.9 bits (69), Expect = 9.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +1
Query: 169 HRERRXLQARSTFRLYPVMVSLLRLQK----LPHRQLIRRVSDVPENR 300
HRER L+ RSTFR P V+ ++L K L H+ + + D R
Sbjct: 142 HREREQLRVRSTFRPVPATVTNVQLVKEMDMLKHKVTVSFIDDAGRRR 189
>UniRef50_Q6C5E7 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 467
Score = 31.9 bits (69), Expect = 9.8
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 2 TAATGMTVTP-ASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVS 151
+AAT +T T ASTS +TT V+ T +S ++SAD + T S
Sbjct: 241 SAATSVTTTADASTSAATSVTTTADVSTSARSATTTSEASISADNSVGTTS 291
>UniRef50_A3CWJ6 Cluster: Putative uncharacterized protein
precursor; n=1; Methanoculleus marisnigri JR1|Rep:
Putative uncharacterized protein precursor -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 430
Score = 31.9 bits (69), Expect = 9.8
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 5 AATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSV 154
+ G+TVTP V Q+ A P+ +SFR ++ TK T V
Sbjct: 180 SVNGVTVTPTGEGVASTQTAVFLGALSPDEEKNASFRIQASQSTKLTFDV 229
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,711,943
Number of Sequences: 1657284
Number of extensions: 7540904
Number of successful extensions: 19514
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 18614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19495
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -