Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0424
         (544 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.            31   3.4  
X74955-1|CAA52910.1|  622|Homo sapiens mucin protein.                  31   3.4  
AF253321-1|AAF64523.1|  716|Homo sapiens cervical mucin MUC5B pr...    31   3.4  
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.              30   4.6  

>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
          Length = 3570

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +2

Query: 2    TAATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTIT 172
            TA+TG T TP+ST         LT        T+S   + S+ +T  T+ V   T T
Sbjct: 2877 TASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTSTAT 2933


>X74955-1|CAA52910.1|  622|Homo sapiens mucin protein.
          Length = 622

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +2

Query: 2   TAATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTIT 172
           TA+TG T TP+ST         LT        T+S   + S+ +T  T+ V   T T
Sbjct: 91  TASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTTTAT 147


>AF253321-1|AAF64523.1|  716|Homo sapiens cervical mucin MUC5B
           protein.
          Length = 716

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +2

Query: 2   TAATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTIT 172
           TA+TG T TP+ST         LT        T+S   + S+ +T  T+ V   T T
Sbjct: 351 TASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTSTAT 407


>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
          Length = 2448

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +2

Query: 2    TAATGMTVTPASTSVVKGQSTTLTVAFXPEGVTASSFRAVSADKTKATVSVXGMTIT 172
            T+  G T +P  T+      TT T +  P G T+      S   T +T+S    +IT
Sbjct: 2333 TSVPGTTPSPVLTTSTTSAPTTRTTSASPAGTTSGPGNTPSPVPTTSTISAPTTSIT 2389


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,128,937
Number of Sequences: 237096
Number of extensions: 1150271
Number of successful extensions: 2310
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2308
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)