Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0421
(473 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK126724-1|BAC86659.1| 131|Homo sapiens protein ( Homo sapiens ... 31 1.5
AK125034-1|BAC86027.1| 134|Homo sapiens protein ( Homo sapiens ... 31 1.5
BC106049-1|AAI06050.1| 204|Homo sapiens NSUN5C protein protein. 31 2.7
U22376-3|AAB49034.1| 666|Homo sapiens c-myb protein. 30 3.6
AJ616791-8|CAF04484.1| 726|Homo sapiens protein ( . ).). 30 3.6
AJ606323-1|CAE55174.1| 659|Homo sapiens v-myb myeloblastosis vi... 30 3.6
AK127614-1|BAC87057.1| 137|Homo sapiens protein ( Homo sapiens ... 30 4.7
AK127774-1|BAC87127.1| 132|Homo sapiens protein ( Homo sapiens ... 29 6.2
AL158835-5|CAH73216.1| 244|Homo sapiens erythroid differentiati... 29 8.2
AK126660-1|BAC86633.1| 165|Homo sapiens protein ( Homo sapiens ... 29 8.2
AK025270-1|BAB15100.1| 244|Homo sapiens protein ( Homo sapiens ... 29 8.2
>AK126724-1|BAC86659.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ44770 fis, clone BRACE3032980. ).
Length = 131
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 349 WLSTGLTRPLPPGXVSSSCCSKSAPW*ATH--PC 254
W G +PLPPG SC S + W H PC
Sbjct: 59 WRDLGSLQPLPPGFTQFSCLSLPSSWDYRHMPPC 92
>AK125034-1|BAC86027.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ43044 fis, clone BRTHA3003474. ).
Length = 134
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 349 WLSTGLTRPLPPGXVSSSCCSKSAPW*ATHP 257
WL G +P PPG SC S + W HP
Sbjct: 81 WLDIGSLQPPPPGFKQFSCLSLLSSWDYRHP 111
>BC106049-1|AAI06050.1| 204|Homo sapiens NSUN5C protein protein.
Length = 204
Score = 30.7 bits (66), Expect = 2.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 352 PWLSTGLTRPLPPGXVSSSCCSKSAPW 272
PW G +PLPPG SC S + W
Sbjct: 9 PWRDLGSPQPLPPGFKRFSCFSLLSSW 35
>U22376-3|AAB49034.1| 666|Homo sapiens c-myb protein.
Length = 666
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 349 WLSTGLTRPLPPGXVSSSCCSKSAPW*ATHP 257
W G +PLPPG SC S W HP
Sbjct: 571 WHDFGSLQPLPPGFKRFSCLSLPRSWDYRHP 601
>AJ616791-8|CAF04484.1| 726|Homo sapiens protein ( . ).).
Length = 726
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 349 WLSTGLTRPLPPGXVSSSCCSKSAPW*ATHP 257
W G +PLPPG SC S W HP
Sbjct: 571 WHDFGSLQPLPPGFKRFSCLSLPRSWDYRHP 601
>AJ606323-1|CAE55174.1| 659|Homo sapiens v-myb myeloblastosis viral
oncogene homologue (avian) protein.
Length = 659
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 349 WLSTGLTRPLPPGXVSSSCCSKSAPW*ATHP 257
W G +PLPPG SC S W HP
Sbjct: 571 WHDFGSLQPLPPGFKRFSCLSLPRSWDYRHP 601
>AK127614-1|BAC87057.1| 137|Homo sapiens protein ( Homo sapiens
cDNA FLJ45712 fis, clone FEKID2002231. ).
Length = 137
Score = 29.9 bits (64), Expect = 4.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 349 WLSTGLTRPLPPGXVSSSCCSKSAPW 272
W + GL +PLPPG SC + + W
Sbjct: 52 WCNLGLLQPLPPGFKRFSCPNLPSSW 77
>AK127774-1|BAC87127.1| 132|Homo sapiens protein ( Homo sapiens
cDNA FLJ45875 fis, clone OCBBF3007704. ).
Length = 132
Score = 29.5 bits (63), Expect = 6.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 349 WLSTGLTRPLPPGXVSSSCCSKSAPW*ATH 260
W G +PLPPG SC S + W H
Sbjct: 34 WYDLGSPQPLPPGFKQFSCLSLLSSWGYRH 63
>AL158835-5|CAH73216.1| 244|Homo sapiens erythroid
differentiation-related factor 1 (EDRF1) protein.
Length = 244
Score = 29.1 bits (62), Expect = 8.2
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 349 WLSTGLTRPLPPGXVSSSCCSKSAPW*ATH--PC 254
W + G +P PPG SC S + W H PC
Sbjct: 196 WCNLGSLKPPPPGFKQFSCLSLPSSWNYRHAPPC 229
>AK126660-1|BAC86633.1| 165|Homo sapiens protein ( Homo sapiens
cDNA FLJ44704 fis, clone BRACE3016810. ).
Length = 165
Score = 29.1 bits (62), Expect = 8.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 349 WLSTGLTRPLPPGXVSSSCCSKSAPW*ATHPC 254
W + GL +PLPP SC S + W H C
Sbjct: 65 WRNLGLPQPLPPRFKQFSCLSLPSSW--DHRC 94
>AK025270-1|BAB15100.1| 244|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21617 fis, clone COL07481. ).
Length = 244
Score = 29.1 bits (62), Expect = 8.2
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 349 WLSTGLTRPLPPGXVSSSCCSKSAPW*ATH--PC 254
W + G +P PPG SC S + W H PC
Sbjct: 196 WCNLGSLKPPPPGFKQFSCLSLPSSWNYRHAPPC 229
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,588,424
Number of Sequences: 237096
Number of extensions: 1047513
Number of successful extensions: 2145
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2145
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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