Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0416
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   1.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   5.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.6  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 101 ETLGRIINVIGEPIDERXPIPTDKTAAIHAEAPEFVDMS 217
           +TLG   N I EP+ +     T K ++  A AP   D++
Sbjct: 380 QTLGGSSNEIVEPVPQPVEEVTQKPSSTKAPAPPSRDLT 418


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 269 LMPKEERLGCLAELVWAKLY*LWN*STMLP 358
           L+     + C++E VW+KL    N    LP
Sbjct: 103 LLDTGSEVSCISEEVWSKLIETGNKPPTLP 132


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 271 KERADRDFYTSYE 233
           KE+AD  +Y SY+
Sbjct: 421 KEKADFQYYVSYD 433


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 4/15 (26%), Positives = 10/15 (66%)
 Frame = +2

Query: 653 WSYPICCRISALLWL 697
           W++   C + A++W+
Sbjct: 330 WAFSNACEVMAIVWI 344


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 4/15 (26%), Positives = 10/15 (66%)
 Frame = +2

Query: 653 WSYPICCRISALLWL 697
           W++   C + A++W+
Sbjct: 330 WAFSNACEVMAIVWI 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,353
Number of Sequences: 336
Number of extensions: 3308
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)