Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0415
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.5  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 289 YIYCDLLKKITFAKKQILIMFSVATLTSV 375
           YI C L  K+T   ++I   FSV  L S+
Sbjct: 231 YILCRLHYKLTSVMQKINSAFSVQLLVSI 259


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 289 YIYCDLLKKITFAKKQILIMFSVATLTSV 375
           YI C L  K+T   ++I   FSV  L S+
Sbjct: 231 YILCRLHYKLTSVMQKINSAFSVQLLVSI 259


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 69  CANYYNDNTAINKELHGCTA*KFLNK 146
           CA+ Y     IN  ++G    +F+NK
Sbjct: 83  CASIYVGTVWINTSINGTKFIEFINK 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,795
Number of Sequences: 336
Number of extensions: 2675
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)