Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0414
         (570 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13168-1|CAA31566.1|  527|Drosophila melanogaster S-adenosylhomo...    29   4.4  
U31961-1|AAA84400.1|  504|Drosophila melanogaster S-adenosylhomo...    29   4.4  
AY113501-1|AAM29506.1|  492|Drosophila melanogaster RE58316p pro...    29   4.4  
AE014297-2278|AAS65160.1|  504|Drosophila melanogaster CG8956-PD...    29   4.4  
AE014297-2277|AAF55367.2|  492|Drosophila melanogaster CG8956-PC...    29   4.4  

>X13168-1|CAA31566.1|  527|Drosophila melanogaster
           S-adenosylhomocysteine hydrolase protein.
          Length = 527

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 529 SLIVIHKHY*YTKNGKVHWEILNVNFFTTLHKVTTFY 419
           S+  +H+ Y  +K GK+    +NVN   T +K  TFY
Sbjct: 218 SVTGVHRLYMLSKGGKLTVPAINVNDSVTKNKFDTFY 254


>U31961-1|AAA84400.1|  504|Drosophila melanogaster
           S-adenosylhomocysteine hydrolase protein.
          Length = 504

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 529 SLIVIHKHY*YTKNGKVHWEILNVNFFTTLHKVTTFY 419
           S+  +H+ Y  +K GK+    +NVN   T +K  TFY
Sbjct: 218 SVTGVHRLYMLSKGGKLTVPAINVNDSVTKNKFDTFY 254


>AY113501-1|AAM29506.1|  492|Drosophila melanogaster RE58316p
           protein.
          Length = 492

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 529 SLIVIHKHY*YTKNGKVHWEILNVNFFTTLHKVTTFY 419
           S+  +H+ Y  +K GK+    +NVN   T +K  TFY
Sbjct: 218 SVTGVHRLYMLSKGGKLTVPAINVNDSVTKNKFDTFY 254


>AE014297-2278|AAS65160.1|  504|Drosophila melanogaster CG8956-PD,
           isoform D protein.
          Length = 504

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 529 SLIVIHKHY*YTKNGKVHWEILNVNFFTTLHKVTTFY 419
           S+  +H+ Y  +K GK+    +NVN   T +K  TFY
Sbjct: 218 SVTGVHRLYMLSKGGKLTVPAINVNDSVTKNKFDTFY 254


>AE014297-2277|AAF55367.2|  492|Drosophila melanogaster CG8956-PC,
           isoform C protein.
          Length = 492

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 529 SLIVIHKHY*YTKNGKVHWEILNVNFFTTLHKVTTFY 419
           S+  +H+ Y  +K GK+    +NVN   T +K  TFY
Sbjct: 218 SVTGVHRLYMLSKGGKLTVPAINVNDSVTKNKFDTFY 254


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,720,631
Number of Sequences: 53049
Number of extensions: 419701
Number of successful extensions: 1156
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)