Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0413
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   1.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.7  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   9.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.7  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 363 KQFVMCIDNLISFYLRFIFCKVFFYCISLL 274
           +QF    +  +  YL FIF  VFF+ I L+
Sbjct: 83  QQFECDNEPKLRHYLIFIFVNVFFWVIILM 112


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 71  RFAEHGGYHYRYNDANTG 124
           RF    GY YR+   N G
Sbjct: 271 RFTVEQGYRYRFRVINAG 288


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 366 NKQFVMCIDNLISFYLRFIF 307
           N  +V C DN  + +LR +F
Sbjct: 156 NLVYVYCCDNNFNVFLRQVF 175


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 694 ILWNCRELFAISIILPVELNYIRATELTLATYL 596
           ILW+C        ++ + L+Y    E+ L T L
Sbjct: 256 ILWSCTSTNCPRFLIMLALSYTVIQEVMLFTIL 288


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 323 ICVSFFVKFFFIVYHY 276
           +C+ F+  FF++ Y Y
Sbjct: 80  LCLPFYSYFFYLSYIY 95


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 362 LFDVIKLKFYANFHVLSKTK 421
           +F ++ LK+   +  LSKTK
Sbjct: 385 IFGLVNLKYRETYFRLSKTK 404


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -2

Query: 375 ITSNKQFVMCIDNLISFYLRFIFCKVFFYCISLLKRM 265
           +T     V   DN+  F L        F C ++LK++
Sbjct: 143 VTQQNSDVFIFDNVWLFILWVGILSTIFLCDTILKKV 179


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 323 ICVSFFVKFFFIVYHY 276
           +C+ F+  FF++ Y Y
Sbjct: 36  LCLPFYSYFFYLSYIY 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,326
Number of Sequences: 336
Number of extensions: 2665
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)