Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0412
(699 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 94 3e-18
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 91 2e-17
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 88 2e-16
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 82 1e-14
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 81 2e-14
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 81 3e-14
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 80 6e-14
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 79 1e-13
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 78 2e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 78 2e-13
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 78 2e-13
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 78 2e-13
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 77 4e-13
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 77 4e-13
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 77 6e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 74 4e-12
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 73 5e-12
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 73 5e-12
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 73 5e-12
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 73 5e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 73 9e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 72 1e-11
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 71 3e-11
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 70 6e-11
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 69 8e-11
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 66 8e-10
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 65 1e-09
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 64 2e-09
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 64 2e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 64 2e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 64 2e-09
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 62 1e-08
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 61 3e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 61 3e-08
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 60 4e-08
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 60 7e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 58 3e-07
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 57 4e-07
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 57 4e-07
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 54 3e-06
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 53 6e-06
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 52 1e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 51 2e-05
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 51 3e-05
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 51 3e-05
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 50 7e-05
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 49 1e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 49 1e-04
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 48 2e-04
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 48 2e-04
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 48 2e-04
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 48 3e-04
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 46 9e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 46 9e-04
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 46 0.001
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 45 0.002
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 44 0.004
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 43 0.008
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 42 0.015
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 42 0.015
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 42 0.019
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 42 0.019
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 42 0.019
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 41 0.025
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 41 0.034
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 40 0.044
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 40 0.059
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 40 0.059
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 40 0.059
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 40 0.078
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 39 0.10
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.10
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 39 0.10
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 38 0.18
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 38 0.18
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 38 0.31
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 38 0.31
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 37 0.55
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 36 0.96
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 36 0.96
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 36 0.96
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 35 2.2
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 35 2.2
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 35 2.2
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 35 2.2
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 33 5.1
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 6.7
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 93.9 bits (223), Expect = 3e-18
Identities = 45/61 (73%), Positives = 49/61 (80%)
Frame = +1
Query: 511 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VF 690
DQ+PLFV AVGITAF AGAIT+LL+DR+LNTSFFDPAGGGDPILYQHLF F
Sbjct: 176 DQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFF 235
Query: 691 G 693
G
Sbjct: 236 G 236
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/63 (68%), Positives = 45/63 (71%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLA
Sbjct: 91 FPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLA 150
Query: 437 GIS 445
GIS
Sbjct: 151 GIS 153
Score = 75.8 bits (178), Expect = 1e-12
Identities = 41/82 (50%), Positives = 44/82 (53%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
+HKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 8 NHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMV 67
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVPL+LGAPD+
Sbjct: 68 MPIMIGGFGNWLVPLMLGAPDM 89
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 91.1 bits (216), Expect = 2e-17
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = +1
Query: 511 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VF 690
DQ+PLF+ AVGITA AGAIT+LL+DR+LNTSFFDPAGGGDPILYQHLF F
Sbjct: 152 DQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFF 211
Query: 691 G 693
G
Sbjct: 212 G 212
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/63 (68%), Positives = 45/63 (71%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLA
Sbjct: 67 FPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLA 126
Query: 437 GIS 445
GIS
Sbjct: 127 GIS 129
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = +3
Query: 96 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 254
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDM 65
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/64 (64%), Positives = 48/64 (75%)
Frame = -1
Query: 447 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 268
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 267 IRGN 256
IRGN
Sbjct: 138 IRGN 141
Score = 84.2 bits (199), Expect = 3e-15
Identities = 47/93 (50%), Positives = 54/93 (58%)
Frame = -3
Query: 304 KGGG*ESKSYIIYSWECISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 125
K GG + +SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 124 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 26
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/58 (63%), Positives = 43/58 (74%)
Frame = -2
Query: 680 NKC*YKIGSPPPAGSKNDVFKSRSDNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SM 507
NKC + IGSPPPAGSK +VFK RS +IVIAPA TGS++N+K AV T TN G SM
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/60 (65%), Positives = 46/60 (76%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
+LPLFV +V +TAF AGAIT+LL+DR+ NT+FFDPAGGGDPILYQHLF FG
Sbjct: 183 RLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFG 242
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+
Sbjct: 97 FPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLS 156
Query: 437 GIS 445
G+S
Sbjct: 157 GVS 159
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 182
+HKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 12 NHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFF 71
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N VP+++GAPD+
Sbjct: 72 MVMPAMIGGFGNWFVPILIGAPDM 95
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 81.4 bits (192), Expect = 2e-14
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+ +LPLFV A+ +TA AGAIT+LL+DR+ NTSF+DPAGGGDPILYQHLF
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWF 237
Query: 688 FG 693
FG
Sbjct: 238 FG 239
Score = 72.5 bits (170), Expect = 9e-12
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLS 153
Query: 437 GIS 445
GIS
Sbjct: 154 GIS 156
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 188
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVP+++GAPD+
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDM 92
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF 681
++PLFV AV ITA AGAIT+LL+DR++NTSFFDPAGGGDPILYQHLF
Sbjct: 99 RMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLF 154
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/62 (59%), Positives = 41/62 (66%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR N+ F VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+A
Sbjct: 13 FPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMA 72
Query: 437 GI 442
G+
Sbjct: 73 GV 74
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+ ++PLFV +V ITA AGAIT+LL+DR NT+FFDPAGGGDPILYQHLF
Sbjct: 179 MSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWF 238
Query: 688 FGA 696
FGA
Sbjct: 239 FGA 241
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLA
Sbjct: 95 FPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLA 154
Query: 437 GIS 445
G+S
Sbjct: 155 GLS 157
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/82 (37%), Positives = 40/82 (48%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
+HKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 12 NHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLV 71
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N VPL++GAPD+
Sbjct: 72 MPTMIGGFGNWFVPLMIGAPDM 93
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF 681
+ +LPLFV A+ +TA AGAIT+LL+DR+ NTSF+DPAGGGDPILYQHLF
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 72.5 bits (170), Expect = 9e-12
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLS 153
Query: 437 GIS 445
GIS
Sbjct: 154 GIS 156
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 188
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVP+++GAPD+
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDM 92
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 77.8 bits (183), Expect = 2e-13
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+D++ LF +V ITA AGAIT+LL+DR++NTSFFDP+GGGDPILYQHLF
Sbjct: 162 MDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWF 221
Query: 688 FG 693
FG
Sbjct: 222 FG 223
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/63 (50%), Positives = 36/63 (57%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLA
Sbjct: 78 FPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLA 137
Query: 437 GIS 445
G S
Sbjct: 138 GAS 140
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +3
Query: 96 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 254
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD+
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDM 76
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLA
Sbjct: 77 FPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLA 136
Query: 437 GIS 445
G+S
Sbjct: 137 GVS 139
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/58 (63%), Positives = 43/58 (74%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF 681
I+ + LFV +V ITA AGAIT+LL+DR+ NTSFFDPAGGGDPILYQHLF
Sbjct: 161 IELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/53 (50%), Positives = 32/53 (60%)
Frame = +3
Query: 96 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 254
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDM 75
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/60 (63%), Positives = 43/60 (71%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
Q PLFV AV +TA A IT+LL+DR+LNT+FFDPAGGGDPILYQHLF FG
Sbjct: 180 QTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLA
Sbjct: 94 FPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLA 153
Query: 437 GIS 445
G+S
Sbjct: 154 GVS 156
Score = 68.5 bits (160), Expect = 1e-10
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
+HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 11 NHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 71 MPILIGGFGNWLVPLMIGAPDM 92
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
++PLFV ++ +TAF AGAIT+LL+DR+ NTSFFD +GGGDPILYQHLF FG
Sbjct: 188 RIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFG 247
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++
Sbjct: 102 FPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHIS 161
Query: 437 GIS 445
G S
Sbjct: 162 GAS 164
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 182
+HKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 17 NHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFF 76
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N LVP+++G+PD+
Sbjct: 77 MVMPVMIGGFGNWLVPIMIGSPDM 100
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/63 (61%), Positives = 43/63 (68%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLA
Sbjct: 95 FPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLA 154
Query: 437 GIS 445
GIS
Sbjct: 155 GIS 157
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/60 (63%), Positives = 43/60 (71%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
Q PLFV +V ITA A IT+LL+DR+LNT+FFDPAGGGDPILYQHLF FG
Sbjct: 181 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/82 (45%), Positives = 43/82 (52%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
+HKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 12 NHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMV 71
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 72 MPIMIGGFGNWLVPLMIGAPDM 93
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/60 (63%), Positives = 43/60 (71%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
Q PLFV +V ITA A IT+LL+DR+LNT+FFDPAGGGDPILYQHLF FG
Sbjct: 180 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/63 (55%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLA
Sbjct: 94 FPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLA 153
Query: 437 GIS 445
G+S
Sbjct: 154 GVS 156
Score = 66.9 bits (156), Expect = 4e-10
Identities = 35/82 (42%), Positives = 42/82 (51%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
+HKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 11 NHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 71 MPIMIGGFGNWLVPLMIGAPDM 92
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
Q PLFV +V +TA A IT+LL+DR+LNT+FFDPAGGGDPILYQHLF FG
Sbjct: 180 QTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLA
Sbjct: 94 FPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLA 153
Query: 437 GIS 445
G+S
Sbjct: 154 GVS 156
Score = 68.5 bits (160), Expect = 1e-10
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
+HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 11 NHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 71 MPVMIGGFGNWLVPLMIGAPDM 92
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLA
Sbjct: 83 FPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLA 142
Query: 437 GIS 445
GIS
Sbjct: 143 GIS 145
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/81 (43%), Positives = 41/81 (50%)
Frame = +3
Query: 12 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 191
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 192 XXXXXXXXN*LVPLILGAPDI 254
N L+PL++GAPD+
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDM 81
Score = 46.0 bits (104), Expect = 9e-04
Identities = 24/43 (55%), Positives = 28/43 (65%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDP 642
Q PLFV AV ITA A IT+LL+DR+LNT+FFDP
Sbjct: 169 QTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 73.3 bits (172), Expect = 5e-12
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+ ++PLF +V +TA+ AGAIT+LL+DR+ T+FFDPAGGGDPIL+QH+F
Sbjct: 284 LHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWF 343
Query: 688 FG 693
FG
Sbjct: 344 FG 345
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++
Sbjct: 200 FPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVS 259
Query: 437 GIS 445
G S
Sbjct: 260 GAS 262
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = +1
Query: 517 LPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
LPLFV +V +T+F A AIT+LL DR+ NTSF+DP GGGD +LYQHLF FG
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFG 243
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/62 (51%), Positives = 34/62 (54%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN F E G GTG TVYPPLSS +H G SVDL IFS HL
Sbjct: 98 FPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLV 157
Query: 437 GI 442
GI
Sbjct: 158 GI 159
Score = 37.1 bits (82), Expect = 0.41
Identities = 24/84 (28%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 182
+HK IG LY EL PG L G+ YN I T H
Sbjct: 13 NHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFV 72
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N VP+++GAPD+
Sbjct: 73 VVMPILFGGFGNYFVPILIGAPDM 96
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 95 FPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLT 154
Query: 437 GIS 445
IS
Sbjct: 155 SIS 157
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
+LPLFV ++ ITAF + IT+LL DR+ NTSFF+ +GGGDPILY+HLF FG
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 95 FPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLT 154
Query: 437 GIS 445
IS
Sbjct: 155 SIS 157
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
+LPLFV ++ ITAF + IT+LL DR+ NTSFF+ +GGGDPILY+HLF FG
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 72.5 bits (170), Expect = 9e-12
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLS 153
Query: 437 GIS 445
GIS
Sbjct: 154 GIS 156
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 188
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVP+++GAPD+
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDM 92
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 95 FPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLT 154
Query: 437 GIS 445
IS
Sbjct: 155 SIS 157
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
++PLFV A+ ITAF + IT+LL DR+ NTSFF+ AGGGDPI YQH F FG
Sbjct: 181 KMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFG 240
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 95 FPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMT 154
Query: 437 GIS 445
IS
Sbjct: 155 SIS 157
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/62 (53%), Positives = 42/62 (67%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
+LPLFV A+ ITA + +T+LL DR+ NTSFF+ AGGGDPILY+HLF FG
Sbjct: 181 KLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Query: 694 AS 699
+
Sbjct: 241 TT 242
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/62 (53%), Positives = 43/62 (69%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+ ++PLFV +V +TAF A AIT+LL+DR+ T+F+D AGGGDP LYQHLF
Sbjct: 221 LHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWF 280
Query: 688 FG 693
FG
Sbjct: 281 FG 282
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 424
FPR+NNI F V NGAGTG TVY PLS++ G +VD+AI S
Sbjct: 134 FPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILS 192
Query: 425 LHLAGIS 445
LH+AG S
Sbjct: 193 LHIAGAS 199
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 69.3 bits (162), Expect = 8e-11
Identities = 35/62 (56%), Positives = 42/62 (67%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+ +L LF AV ITA AG IT++L+DR+ NTSFF+ AGGGDPILYQHLF
Sbjct: 179 LHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWF 238
Query: 688 FG 693
FG
Sbjct: 239 FG 240
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+
Sbjct: 95 FPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLS 154
Query: 437 GIS 445
GIS
Sbjct: 155 GIS 157
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 191
KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 13 KDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVM 72
Query: 192 XXXXXXXXN*LVPLILGAPDI 254
N L+PL LG PD+
Sbjct: 73 PALIGGFGNFLLPLGLGGPDM 93
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 66.1 bits (154), Expect = 8e-10
Identities = 35/62 (56%), Positives = 42/62 (67%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+ +L LF AV ITA A AIT+LL+DR+LNTSF++ AGGGD ILYQHLF
Sbjct: 205 LHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWF 264
Query: 688 FG 693
FG
Sbjct: 265 FG 266
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+
Sbjct: 121 FPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLS 180
Query: 437 GIS 445
GIS
Sbjct: 181 GIS 183
Score = 39.9 bits (89), Expect = 0.059
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 191
KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 39 KDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVM 98
Query: 192 XXXXXXXXN*LVPLILGAPDI 254
N L+P+++G PD+
Sbjct: 99 PALIGGFGNFLLPILIGGPDM 119
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/56 (57%), Positives = 36/56 (64%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 424
FPR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 10 FPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 56.4 bits (130), Expect = 6e-07
Identities = 29/60 (48%), Positives = 33/60 (55%)
Frame = +3
Query: 513 SITLICMSCRDYSXXXXXXTTCFSWSYYNIIIRSRLKYIIF*SCWRWRPNFISTFILSFW 692
SIT ICM C +Y TCFS S+Y II + KY IF W P +STFIL FW
Sbjct: 92 SITFICMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFW 151
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 437 GIS 445
G+S
Sbjct: 172 GLS 174
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
+LPLFV +V ITA A +T+LL DR+ NTSFF +GGGDP+LY+H+F FG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 437 GIS 445
G+S
Sbjct: 172 GLS 174
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
+LPLFV +V ITA A +T+LL DR+ NTSFF +GGGDP+LY+H+F FG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 437 GIS 445
G+S
Sbjct: 172 GLS 174
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
+LPLFV +V ITA A +T+LL DR+ NTSFF +GGGDP+LY+H+F FG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 437 GIS 445
G+S
Sbjct: 172 GLS 174
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF 681
+LPLFV +V ITA A +T+LL DR+ NTSFF +GGGDP+LY+H+F
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFS 424
FPR+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+
Sbjct: 123 FPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFA 182
Query: 425 LHLAGIS 445
LHL+G+S
Sbjct: 183 LHLSGVS 189
Score = 56.8 bits (131), Expect = 5e-07
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +1
Query: 592 ITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
IT++L+DR+ NTSFF+ AGGGDPIL+QHLF FG
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFG 265
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 191
KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 41 KDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVM 100
Query: 192 XXXXXXXXN*LVPLILGAPDI 254
N L+PL++G PD+
Sbjct: 101 PALIGGFGNFLMPLMIGGPDM 121
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+DQ+ +FV +T+F AG++ LL DR+ NTSF+D GG+P+LYQHLF
Sbjct: 188 LDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWF 247
Query: 688 FG 693
FG
Sbjct: 248 FG 249
Score = 40.3 bits (90), Expect = 0.044
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 182
+HK IGT Y EL +PG G Q+YN+++T H
Sbjct: 20 NHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFF 79
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N ++PL+LGAP++
Sbjct: 80 LVMPILIGGFGNWMLPLMLGAPEM 103
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+N + F + G G+ T YPPLS S+D I LH
Sbjct: 105 FPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTV 163
Query: 437 GI 442
GI
Sbjct: 164 GI 165
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
F R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+
Sbjct: 100 FARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLS 159
Query: 437 GIS 445
G S
Sbjct: 160 GFS 162
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = +1
Query: 511 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF 681
+ +PLF AV TA A +T+ + DR+ NTSFF+ AGGGD +LYQHLF
Sbjct: 185 ENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLF 241
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 60.5 bits (140), Expect = 4e-08
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
+HKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 12 NHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMX 71
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 72 MPIMIGGFGNWLVPLMIGAPDM 93
Score = 39.1 bits (87), Expect = 0.10
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 376
FPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 95 FPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 59.7 bits (138), Expect = 7e-08
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = +1
Query: 523 LFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
LF+ A ITA AG +T++L DR+ NTSF+D GGGD IL+QH+F FG
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFG 242
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F + E G G G T+YP L H + D +F++HL
Sbjct: 97 FPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLL 156
Query: 437 GIS 445
GIS
Sbjct: 157 GIS 159
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +2
Query: 326 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 445
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG S
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGAS 51
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 57.2 bits (132), Expect = 4e-07
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +1
Query: 583 AGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
A IT+LL DR+ T+FF+P+GGGDPIL+QHLF FG
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFG 329
Score = 37.5 bits (83), Expect = 0.31
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +2
Query: 338 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 445
G G G T+YPPLS G VD +FSLHLAG+S
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVS 251
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 57.2 bits (132), Expect = 4e-07
Identities = 53/186 (28%), Positives = 72/186 (38%)
Frame = +3
Query: 96 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIHSHE*II 275
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 276 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFHQL* 455
F +P +Y + K +DE TP + + + +F ++ V L
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 456 ERXXXXXXXXXXXXXXXH*SITLICMSCRDYSXXXXXXTTCFSWSYYNIIIRSRLKYIIF 635
+ + T IC+ Y TC S SYY II L + I
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 636 *SCWRW 653
W W
Sbjct: 203 ---WPW 205
Score = 33.9 bits (74), Expect = 3.9
Identities = 23/63 (36%), Positives = 28/63 (44%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F + G + PL G SVDLAIF LHLA
Sbjct: 78 FPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLA 135
Query: 437 GIS 445
G+S
Sbjct: 136 GVS 138
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/62 (43%), Positives = 39/62 (62%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF
Sbjct: 194 LDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWF 253
Query: 688 FG 693
FG
Sbjct: 254 FG 255
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 53.2 bits (122), Expect = 6e-06
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 583 AGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
A +T+LL DR +TSF+ P GGGDPIL+QHLF FG
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFG 242
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +2
Query: 260 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 439
PR+NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 440 IS 445
+S
Sbjct: 157 MS 158
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/82 (24%), Positives = 32/82 (39%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
+HKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 13 NHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFV 72
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N +PL++ D+
Sbjct: 73 MPTSIGGLGNWFIPLMIKIKDL 94
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = +1
Query: 586 GAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
G + +LLSD NT FFDP GDPILYQHLF FG
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFG 245
Score = 40.7 bits (91), Expect = 0.034
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHL 433
+PRIN+I E G GTG T+YPPLS+++ +VD+ IF L +
Sbjct: 99 YPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLV 158
Query: 434 AGIS 445
+G++
Sbjct: 159 SGVA 162
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +2
Query: 260 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 439
PR+ N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 440 IS 445
IS
Sbjct: 145 IS 146
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +1
Query: 517 LPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
L LF ++ + + A IT++L+D+ L T F+D GGDP+LYQHLF FG
Sbjct: 165 LSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFG 223
Score = 35.1 bits (77), Expect = 1.7
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +2
Query: 341 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 445
A G T YPPLSS SV+ ++FSLHLAGI+
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIA 142
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +1
Query: 493 IK*YIIDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQ 672
IK + +PLF A+ T+ A A+ +L D TSFF+P GGGDP++YQ
Sbjct: 184 IKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQ 243
Query: 673 HLF 681
HLF
Sbjct: 244 HLF 246
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 49.6 bits (113), Expect = 7e-05
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 182
+HKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 13 NHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFF 72
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N VP+++G+PD+
Sbjct: 73 MVMPAMIGGFGNWFVPILIGSPDM 96
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 49.2 bits (112), Expect = 1e-04
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +1
Query: 583 AGAITILLSDRDLNTSFFDPAGGGDPILYQHLF 681
AGA+T+L D+ L T+FF+PA GGDP++YQ++F
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIF 191
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = +3
Query: 531 MSCRDYSXXXXXXTTCFSWSYYNIIIRSRLKYIIF*SCWRWRPNFISTFIL 683
M C +YS +TC WSYYN I S+LKYI+F W F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +1
Query: 511 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VF 690
DQ+ LF ++ IT AG IT+LLSDR+ N FF GG PIL+Q++ +F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 691 G 693
G
Sbjct: 72 G 72
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +1
Query: 502 YIIDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF 681
++ID++ ++ +T+F ++ DR NT FF+ + GDP+LYQHLF
Sbjct: 182 FVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLF 241
Query: 682 *VFG 693
FG
Sbjct: 242 WFFG 245
Score = 40.7 bits (91), Expect = 0.034
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
+PR+N +E G+GTG T+YPPLS+++++ G +D IF L A
Sbjct: 102 YPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAA 159
Query: 437 GIS 445
GI+
Sbjct: 160 GIA 162
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 188
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVP+++GAPD+
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDM 92
Score = 32.7 bits (71), Expect = 8.9
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 385
FPR+NNI F VE GAGTG TV LS I
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+ ++PLFV + + A A+ +LL DR L ++FFDP GG +L+QH F +
Sbjct: 197 LQRVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWI 256
Query: 688 FG 693
FG
Sbjct: 257 FG 258
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 46.0 bits (104), Expect = 9e-04
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPA-----GGGDPILYQHL 678
+LPL + + +TA A +LL DR T FF GGGDPIL+QHL
Sbjct: 213 RLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHL 272
Query: 679 F*VFG 693
F +FG
Sbjct: 273 FWIFG 277
Score = 33.1 bits (72), Expect = 6.7
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 433
FPR+N F G AG G T Y PLS+N+ G L + ++ +
Sbjct: 126 FPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFV 185
Query: 434 AGIS 445
G+S
Sbjct: 186 TGVS 189
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 46.0 bits (104), Expect = 9e-04
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +2
Query: 368 PLSSNIAHRGRSVDLAIFSLHLAGIS 445
PL+S+IAH G SVD+AIFSLHLAG+S
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVS 97
Score = 33.9 bits (74), Expect = 3.9
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDR 615
+D++PLF+ AV IT AGAIT+LL+DR
Sbjct: 119 LDRVPLFIWAVFITTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF 681
++P+FV G +LL D TSFF P GGGDP+L+QH F
Sbjct: 206 RMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFF 261
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/62 (40%), Positives = 32/62 (51%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
++++PLFV + AF A LL DR T FF P GGD +L+QHLF
Sbjct: 196 LNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWF 255
Query: 688 FG 693
FG
Sbjct: 256 FG 257
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1
Query: 625 TSFFDPAGGGDPILYQHLF*VFG 693
T+FFDPAGGGD IL+QHLF FG
Sbjct: 194 TTFFDPAGGGDXILFQHLFXFFG 216
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
ID+LP+ V + + A +L DR+ T FFD A GG P+L+QHLF +
Sbjct: 214 IDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWM 273
Query: 688 F 690
F
Sbjct: 274 F 274
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 41.9 bits (94), Expect = 0.015
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF 681
+ Q+PL + ++ A A+ +LL+DR + FF+PA GGDPI Y HLF
Sbjct: 180 LGQVPLLAWSYLSSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLF 237
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 41.9 bits (94), Expect = 0.015
Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +1
Query: 586 GAITILLS-DRDLNTSFFDPAGGGDPILYQHLF*VFG 693
GA I+++ DR T+FF+ A GGDPIL QHLF FG
Sbjct: 364 GAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFG 400
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 41.5 bits (93), Expect = 0.019
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +1
Query: 610 DRDLNTSFFDPAGGGDPILYQHLF*VFG 693
+R + FFDP GGDP+L+QHLF +FG
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFG 281
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 41.5 bits (93), Expect = 0.019
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1
Query: 589 AITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
AIT LL DR++N++ +D G DP+LYQHLF FG
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFG 249
Score = 33.5 bits (73), Expect = 5.1
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 260 PRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHL 433
PR+N I F ++ +G T+YPPLS+ A G ++DL++ +H+
Sbjct: 105 PRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHV 164
Query: 434 AGIS 445
GIS
Sbjct: 165 LGIS 168
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 41.5 bits (93), Expect = 0.019
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +1
Query: 589 AITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
A+ +LL DR+ T+FF AGG DPI +QHLF FG
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFG 293
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 41.1 bits (92), Expect = 0.025
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
++++P+FV AV + +F A +L DR FF A GDPIL+QHLF
Sbjct: 201 LNRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWF 259
Query: 688 FG 693
FG
Sbjct: 260 FG 261
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 40.7 bits (91), Expect = 0.034
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDL-NTSFFDPAGGGDPILYQHLF 681
++PLFV A+ T+ G + +L++ +L FDPA GGDP+L+QHLF
Sbjct: 206 KMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLF 261
Score = 34.7 bits (76), Expect = 2.2
Identities = 22/82 (26%), Positives = 28/82 (34%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
DHK IG ++ EL PG I D YN T H
Sbjct: 41 DHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFM 100
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N ++PL+LGA D+
Sbjct: 101 IPAIPAVFGNFMLPLMLGAKDV 122
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 40.3 bits (90), Expect = 0.044
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF 681
+LPLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F
Sbjct: 199 RLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFF 254
Score = 35.1 bits (77), Expect = 1.7
Identities = 21/83 (25%), Positives = 30/83 (36%)
Frame = +3
Query: 6 RDHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 185
+DHK IG ++ EL PG I D YN + T H
Sbjct: 33 QDHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLF 92
Query: 186 XXXXXXXXXXN*LVPLILGAPDI 254
N L+P+++GA D+
Sbjct: 93 MIPAIPSGFGNFLLPIMIGAKDV 115
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 39.9 bits (89), Expect = 0.059
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 511 DQLPLFV*AVGITAFXXXXXXXXXAG-AITILLSDRDLNTSFFDPAGGGDPILYQHLF 681
++L +FV A + AF G A+T+L D+ + T FFD A GGD + YQ+LF
Sbjct: 179 NKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLF 235
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 39.9 bits (89), Expect = 0.059
Identities = 23/82 (28%), Positives = 34/82 (41%)
Frame = +3
Query: 9 DHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
DHKDIG LY EL +PG + + YN+++T+H
Sbjct: 93 DHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHG-ITMLFLF 151
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N L+PL++GA D+
Sbjct: 152 ATPIIAAFSNYLIPLLIGADDM 173
Score = 38.7 bits (86), Expect = 0.14
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +1
Query: 589 AITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
AI +LL DR+ TSFF AG G IL+QHLF FG
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFG 324
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 39.9 bits (89), Expect = 0.059
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
+LPLF + + + +++ DR T+FF+P GG+ ++++HLF +FG
Sbjct: 189 RLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFG 248
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 39.5 bits (88), Expect = 0.078
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+ ++P+ + + TAF +L ++R L FFD GGDP+L+QHLF +
Sbjct: 220 LTKMPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWL 279
Query: 688 FG 693
FG
Sbjct: 280 FG 281
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 39.1 bits (87), Expect = 0.10
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
++P+FV +T+ A+ +L+ DR +FF+ GG + YQHLF FG
Sbjct: 200 KMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFG 259
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.1 bits (87), Expect = 0.10
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +1
Query: 259 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 429
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 39.1 bits (87), Expect = 0.10
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF 681
++P++V +V + A ++L +R + S+F+PA GGDP+L+Q F
Sbjct: 190 KMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFF 245
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 38.3 bits (85), Expect = 0.18
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Frame = +1
Query: 583 AGAITILLSDRDLNTSFF-----DPAGGGDPILYQHLF*VFG 693
AGAI +LL +R L FF DPA GDP L+QH+F FG
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFG 249
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 38.3 bits (85), Expect = 0.18
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
++PLFV TA + +R T FFD A GG P+L+Q LF FG
Sbjct: 178 KMPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFG 237
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 37.5 bits (83), Expect = 0.31
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+ ++P+F A+ I A A +L +R FF GGDP+L+QHLF
Sbjct: 204 LTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWF 263
Query: 688 FG 693
FG
Sbjct: 264 FG 265
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 37.5 bits (83), Expect = 0.31
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDP-----------AGGGDP 660
+LPL + A+ ITA A ++L+DR + T FF P AGGG P
Sbjct: 218 RLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQP 277
Query: 661 ILYQHLF 681
+L+QHLF
Sbjct: 278 LLWQHLF 284
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 36.7 bits (81), Expect = 0.55
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+ ++P+F +TA +L +R + FF A GGD +L+QHLF +
Sbjct: 194 LSKMPIFAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWL 253
Query: 688 FG 693
FG
Sbjct: 254 FG 255
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 35.9 bits (79), Expect = 0.96
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+ ++P+F A+ + A A +L +R + FF GGDP+L+QHLF
Sbjct: 263 LGRMPVFAWAMLVFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWF 322
Query: 688 FG 693
FG
Sbjct: 323 FG 324
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 35.9 bits (79), Expect = 0.96
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDP----AG------GGDPI 663
+LPL + A ITA A +L+ DR L TSFF AG GG P+
Sbjct: 232 RLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPV 291
Query: 664 LYQHLF*VFG 693
L+QHLF G
Sbjct: 292 LFQHLFWFLG 301
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 35.9 bits (79), Expect = 0.96
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 10/46 (21%)
Frame = +1
Query: 586 GAITILLSDRDLNTSFFDPA----------GGGDPILYQHLF*VFG 693
G++ +LL DR L TSFF P GGG P+L+QHLF FG
Sbjct: 235 GSVMLLL-DRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFG 279
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*V 687
+D++P++ +TA +L +R FF A GGD +L+QHLF +
Sbjct: 194 LDRMPIYGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWL 253
Query: 688 FG 693
FG
Sbjct: 254 FG 255
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 34.7 bits (76), Expect = 2.2
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = -2
Query: 668 YKIGSPPPAGSKNDVFKSRSDNN--IVIAPAKTGSDNNNKNAVIPTAH 531
Y++ +PP + +KN + ++NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSNKSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFFDPAGGGDPILYQHLF*VFG 693
++P+F + + + A +L DR L +DPA GG +L+QHLF FG
Sbjct: 206 RMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFG 264
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 34.7 bits (76), Expect = 2.2
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLSDRDLNTSFF-DPAGGGDPILYQHLF*VF 690
++P+F ++ T +LL DR+L T FF +PAGG +L+ HLF F
Sbjct: 189 KMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFF 246
Query: 691 G 693
G
Sbjct: 247 G 247
Score = 32.7 bits (71), Expect = 8.9
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 433
FPR+N + + E+GA G T+Y PL++ I G +DLA ++ L
Sbjct: 102 FPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAALAIFL 161
Query: 434 AGIS 445
+S
Sbjct: 162 FSLS 165
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 33.5 bits (73), Expect = 5.1
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +3
Query: 615 RLKYIIF*SCWRWRPNFISTFILSFW 692
+ KYIIF S W F+STFIL FW
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFW 32
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 33.1 bits (72), Expect = 6.7
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 8 RS*RYWNIIFYFWYLIRNNWNIFKTFNS 91
+S YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,125,358
Number of Sequences: 1657284
Number of extensions: 9533316
Number of successful extensions: 22246
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 20413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22081
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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