Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0411
         (705 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    26   1.3  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    26   1.3  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   5.4  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   7.1  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   7.1  

>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 349 NYCYNYKIVNTSLHLLIVFFREE 417
           NY YNY   N S H L  F+R +
Sbjct: 162 NYYYNYYCRNISHHFLRCFYRHK 184


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = +1

Query: 169 DFK*RPQGSSSDSSVHIVTTPYRRPAPYSATPATYK 276
           D +  P   S    V  VT  YR PAP    PA  K
Sbjct: 70  DAEEEPAKGSKRRKVGTVTKAYREPAPKKQAPAKAK 105


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +1

Query: 586 LICSKSQLLTHYVM*YVMLLC*YLHYC-LGVCTYYFGG 696
           ++CS S  +TH  M    LL   + YC L   TY  GG
Sbjct: 138 ILCSLSVAITHVTMVDFKLLQ-VIPYCVLDTITYMMGG 174


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 590 FVQNRNC*RTTLCSMLCCFVNIYTI 664
           ++Q   C   T  S LCCF++++ +
Sbjct: 186 YIQEICCRFFTFSSSLCCFLSVWFV 210


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 12/59 (20%), Positives = 24/59 (40%)
 Frame = -3

Query: 478 KVYHSNSNQPNISTYMKTIIILLERKQLTNGVMY*QFYNYNNNSMNSHQLLELSQ*IHV 302
           K Y  +S  P +  ++       +  Q    +    F+N  N +M +    +L++  HV
Sbjct: 259 KAYTIDSTNPMVLNHLANHFFFKKDYQKVQHLALHAFHNTENEAMRAESCYQLARAFHV 317


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,361
Number of Sequences: 2352
Number of extensions: 15341
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)